Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 LAGE3P1-201ENST00000425356 484 ntBASIC13.58□□□□□ -0.24
NOTCH3Q9UM47 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.58□□□□□ -0.24
NOTCH3Q9UM47 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.58□□□□□ -0.24
NOTCH3Q9UM47 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.58□□□□□ -0.24
NOTCH3Q9UM47 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.58□□□□□ -0.24
NOTCH3Q9UM47 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NOTCH3Q9UM47 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.58□□□□□ -0.24
NOTCH3Q9UM47 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.58□□□□□ -0.24
NOTCH3Q9UM47 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
NOTCH3Q9UM47 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
NOTCH3Q9UM47 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NOTCH3Q9UM47 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NOTCH3Q9UM47 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NOTCH3Q9UM47 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NOTCH3Q9UM47 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 Z83851.2-201ENST00000609564 659 ntBASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 AC093503.3-201ENST00000624917 2352 ntBASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 AC007613.1-201ENST00000572811 2597 ntBASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 ESPNP-201ENST00000270691 2015 ntBASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NOTCH3Q9UM47 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 CNN2P11-201ENST00000429351 262 ntBASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 HTR5BP-201ENST00000430851 1154 ntBASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 MIR3687-2-201ENST00000577708 61 ntBASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 AL596442.2-201ENST00000610240 980 ntBASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 MIR3687-1-201ENST00000614492 61 ntBASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 AC002310.6-201ENST00000624451 1377 ntBASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 AC007967.2-201ENST00000432613 625 ntBASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
NOTCH3Q9UM47 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NOTCH3Q9UM47 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms