Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
DNMT3BQ9UBC3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 HTR5BP-201ENST00000430851 1154 ntBASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 SNHG9-202ENST00000564014 471 ntBASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 OR7E47P-204ENST00000575924 449 ntBASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 AL078644.1-201ENST00000609881 752 ntBASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
DNMT3BQ9UBC3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 AP002414.1-201ENST00000391405 1147 ntBASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 AC254562.1-201ENST00000417586 456 ntBASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 AC002558.1-201ENST00000488906 803 ntBASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 AC004877.2-201ENST00000623941 599 ntBASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 LTB4R2-202ENST00000528054 3092 ntBASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
DNMT3BQ9UBC3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 MKNK2P1-201ENST00000437526 628 ntBASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 METTL21AP1-201ENST00000438852 635 ntBASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 AC096734.2-201ENST00000562054 433 ntBASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 AC010507.1-201ENST00000633895 436 ntBASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.22■□□□□ 0.51
DNMT3BQ9UBC3 ABALON-201ENST00000629058 1903 ntBASIC18.21■□□□□ 0.51
DNMT3BQ9UBC3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DNMT3BQ9UBC3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.21■□□□□ 0.51
DNMT3BQ9UBC3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DNMT3BQ9UBC3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
DNMT3BQ9UBC3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DNMT3BQ9UBC3 AC135050.7-201ENST00000624508 2218 ntBASIC18.21■□□□□ 0.51
DNMT3BQ9UBC3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DNMT3BQ9UBC3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
DNMT3BQ9UBC3 AL354751.1-201ENST00000412768 1863 ntBASIC18.21■□□□□ 0.51
DNMT3BQ9UBC3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DNMT3BQ9UBC3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
DNMT3BQ9UBC3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.21■□□□□ 0.51
DNMT3BQ9UBC3 GGTLC5P-201ENST00000617623 998 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms