Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 COX5BP2-201ENST00000392354 334 ntBASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 AC103564.2-201ENST00000432853 1299 ntBASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 AC122714.2-201ENST00000502787 707 ntBASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 AC011467.2-201ENST00000598425 242 ntBASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PARPBPQ9NWS1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 AC009949.1-201ENST00000623048 1830 ntBASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 AC007967.3-201ENST00000434308 558 ntBASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 AC096582.2-201ENST00000510860 516 ntBASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 BNIP3P18-201ENST00000593976 575 ntBASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 AC114341.1-201ENST00000618070 349 ntBASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.73■□□□□ 0.11
PARPBPQ9NWS1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 FOSL1P1-201ENST00000511041 816 ntBASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 AC091304.2-201ENST00000564639 760 ntBASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 CLEC4GP1-201ENST00000596555 870 ntBASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PARPBPQ9NWS1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms