Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRDM9Q9NQV7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 AC004870.1-201ENST00000315132 882 ntBASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 AL139327.4-201ENST00000612362 153 ntBASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 REXO1L6P-202ENST00000619970 1078 ntBASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 AC106820.2-201ENST00000563775 3264 ntBASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PRDM9Q9NQV7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.58■□□□□ 0.25
PRDM9Q9NQV7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRDM9Q9NQV7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PRDM9Q9NQV7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRDM9Q9NQV7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PRDM9Q9NQV7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 ABCD1P5-201ENST00000445663 754 ntBASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 FAAHP1-202ENST00000446499 1238 ntBASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 SAPCD2P3-201ENST00000455031 850 ntBASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 AL353593.2-201ENST00000602529 1483 ntBASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 AL049757.1-201ENST00000616842 1596 ntBASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PRDM9Q9NQV7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms