Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TUBB1Q9H4B7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TUBB1Q9H4B7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TUBB1Q9H4B7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TUBB1Q9H4B7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TUBB1Q9H4B7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TUBB1Q9H4B7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 AC073912.3-201ENST00000624414 853 ntBASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TUBB1Q9H4B7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 AC093525.9-201ENST00000624961 1746 ntBASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TUBB1Q9H4B7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TUBB1Q9H4B7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TUBB1Q9H4B7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TUBB1Q9H4B7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TUBB1Q9H4B7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TUBB1Q9H4B7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TUBB1Q9H4B7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBB1Q9H4B7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBB1Q9H4B7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBB1Q9H4B7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBB1Q9H4B7 PCDHA14-201ENST00000506751 2298 ntBASIC16.89■□□□□ 0.29
TUBB1Q9H4B7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBB1Q9H4B7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TUBB1Q9H4B7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBB1Q9H4B7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TUBB1Q9H4B7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBB1Q9H4B7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TUBB1Q9H4B7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms