Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 IGHGP-201ENST00000390555 1178 ntBASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 AL441883.1-201ENST00000566170 1045 ntBASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
POLR2J3Q9H1A7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 AC093827.2-201ENST00000512654 315 ntBASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 TNRC18P3-201ENST00000441896 2691 ntBASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.24■□□□□ 0.19
POLR2J3Q9H1A7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 MIR662-201ENST00000384847 95 ntBASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 AC113347.1-201ENST00000413321 391 ntBASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 SPDYE15P-201ENST00000424157 909 ntBASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 AP003733.1-201ENST00000491725 852 ntBASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 ZNF444P1-201ENST00000559497 298 ntBASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
POLR2J3Q9H1A7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 AC096633.1-201ENST00000422446 749 ntBASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 HOMER2P1-201ENST00000455653 964 ntBASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 AC010203.1-204ENST00000548782 407 ntBASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2J3Q9H1A7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms