Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EYA3Q99504 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.2■□□□□ 0.98
EYA3Q99504 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.2■□□□□ 0.98
EYA3Q99504 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC21.2■□□□□ 0.98
EYA3Q99504 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.2■□□□□ 0.98
EYA3Q99504 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC21.2■□□□□ 0.98
EYA3Q99504 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.2■□□□□ 0.98
EYA3Q99504 AC011467.4-201ENST00000594891 528 ntBASIC21.2■□□□□ 0.98
EYA3Q99504 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
EYA3Q99504 AC093028.1-201ENST00000622998 982 ntBASIC21.2■□□□□ 0.98
EYA3Q99504 AL513210.1-201ENST00000629608 234 ntBASIC21.2■□□□□ 0.98
EYA3Q99504 AC092902.6-201ENST00000641783 218 ntBASIC21.2■□□□□ 0.98
EYA3Q99504 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.2■□□□□ 0.98
EYA3Q99504 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.2■□□□□ 0.98
EYA3Q99504 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EYA3Q99504 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EYA3Q99504 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EYA3Q99504 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EYA3Q99504 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EYA3Q99504 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
EYA3Q99504 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.2■□□□□ 0.98
EYA3Q99504 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.2■□□□□ 0.98
EYA3Q99504 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EYA3Q99504 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.19■□□□□ 0.98
EYA3Q99504 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EYA3Q99504 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EYA3Q99504 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EYA3Q99504 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EYA3Q99504 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EYA3Q99504 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EYA3Q99504 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EYA3Q99504 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
EYA3Q99504 FAM8A3P-201ENST00000427218 844 ntBASIC21.19■□□□□ 0.98
EYA3Q99504 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.19■□□□□ 0.98
EYA3Q99504 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.19■□□□□ 0.98
EYA3Q99504 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.19■□□□□ 0.98
EYA3Q99504 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.19■□□□□ 0.98
EYA3Q99504 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.19■□□□□ 0.98
EYA3Q99504 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.19■□□□□ 0.98
EYA3Q99504 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
EYA3Q99504 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EYA3Q99504 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC21.19■□□□□ 0.98
EYA3Q99504 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EYA3Q99504 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EYA3Q99504 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
EYA3Q99504 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EYA3Q99504 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EYA3Q99504 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
EYA3Q99504 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EYA3Q99504 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EYA3Q99504 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.18■□□□□ 0.98
EYA3Q99504 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.18■□□□□ 0.98
EYA3Q99504 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.18■□□□□ 0.98
EYA3Q99504 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
EYA3Q99504 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC21.18■□□□□ 0.98
EYA3Q99504 AC004449.1-201ENST00000564240 433 ntBASIC21.18■□□□□ 0.98
EYA3Q99504 CYB561-216ENST00000582297 897 ntTSL 3 BASIC21.18■□□□□ 0.98
EYA3Q99504 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.18■□□□□ 0.98
EYA3Q99504 REXO1L3P-201ENST00000622202 1288 ntBASIC21.18■□□□□ 0.98
EYA3Q99504 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EYA3Q99504 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EYA3Q99504 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.18■□□□□ 0.98
EYA3Q99504 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
EYA3Q99504 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EYA3Q99504 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EYA3Q99504 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EYA3Q99504 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
EYA3Q99504 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.17■□□□□ 0.98
EYA3Q99504 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.17■□□□□ 0.98
EYA3Q99504 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.17■□□□□ 0.98
EYA3Q99504 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EYA3Q99504 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EYA3Q99504 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EYA3Q99504 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EYA3Q99504 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
EYA3Q99504 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
EYA3Q99504 AL139400.1-201ENST00000366220 510 ntBASIC21.17■□□□□ 0.98
EYA3Q99504 FAM185BP-201ENST00000443595 716 ntBASIC21.17■□□□□ 0.98
EYA3Q99504 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
EYA3Q99504 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EYA3Q99504 AC105339.1-204ENST00000636249 355 ntBASIC21.17■□□□□ 0.98
EYA3Q99504 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EYA3Q99504 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.17■□□□□ 0.98
EYA3Q99504 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EYA3Q99504 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.17■□□□□ 0.98
EYA3Q99504 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EYA3Q99504 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.17■□□□□ 0.98
EYA3Q99504 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EYA3Q99504 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
EYA3Q99504 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
EYA3Q99504 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EYA3Q99504 AL020996.1-203ENST00000536896 2307 ntBASIC21.17■□□□□ 0.98
EYA3Q99504 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.17■□□□□ 0.98
EYA3Q99504 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EYA3Q99504 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EYA3Q99504 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EYA3Q99504 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
EYA3Q99504 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
EYA3Q99504 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.16■□□□□ 0.98
EYA3Q99504 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms