Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PHOX2BQ99453 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
PHOX2BQ99453 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PHOX2BQ99453 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PHOX2BQ99453 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PHOX2BQ99453 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PHOX2BQ99453 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PHOX2BQ99453 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PHOX2BQ99453 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PHOX2BQ99453 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PHOX2BQ99453 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PHOX2BQ99453 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
PHOX2BQ99453 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PHOX2BQ99453 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PHOX2BQ99453 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PHOX2BQ99453 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PHOX2BQ99453 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PHOX2BQ99453 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.71■□□□□ 0.43
PHOX2BQ99453 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PHOX2BQ99453 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.71■□□□□ 0.43
PHOX2BQ99453 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.71■□□□□ 0.43
PHOX2BQ99453 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.71■□□□□ 0.43
PHOX2BQ99453 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PHOX2BQ99453 IGHV3-71-201ENST00000523324 359 ntBASIC17.71■□□□□ 0.43
PHOX2BQ99453 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.71■□□□□ 0.43
PHOX2BQ99453 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
PHOX2BQ99453 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.71■□□□□ 0.43
PHOX2BQ99453 AC051619.7-201ENST00000568314 623 ntBASIC17.71■□□□□ 0.43
PHOX2BQ99453 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.71■□□□□ 0.43
PHOX2BQ99453 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PHOX2BQ99453 AL358472.5-202ENST00000641448 1267 ntBASIC17.71■□□□□ 0.43
PHOX2BQ99453 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PHOX2BQ99453 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PHOX2BQ99453 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.71■□□□□ 0.43
PHOX2BQ99453 AC099343.3-201ENST00000605834 2503 ntBASIC17.71■□□□□ 0.43
PHOX2BQ99453 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PHOX2BQ99453 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
PHOX2BQ99453 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PHOX2BQ99453 TEX21P-204ENST00000641479 1693 ntBASIC17.71■□□□□ 0.42
PHOX2BQ99453 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
PHOX2BQ99453 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PHOX2BQ99453 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHOX2BQ99453 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHOX2BQ99453 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHOX2BQ99453 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PHOX2BQ99453 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHOX2BQ99453 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PHOX2BQ99453 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHOX2BQ99453 U91328.1-201ENST00000437528 223 ntBASIC17.7■□□□□ 0.42
PHOX2BQ99453 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 RN7SL692P-201ENST00000464677 288 ntBASIC17.7■□□□□ 0.42
PHOX2BQ99453 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHOX2BQ99453 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 AC004706.3-202ENST00000621574 984 ntBASIC17.7■□□□□ 0.42
PHOX2BQ99453 AC020916.1-201ENST00000587762 1774 ntBASIC17.7■□□□□ 0.42
PHOX2BQ99453 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHOX2BQ99453 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PHOX2BQ99453 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHOX2BQ99453 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHOX2BQ99453 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PHOX2BQ99453 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHOX2BQ99453 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHOX2BQ99453 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHOX2BQ99453 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHOX2BQ99453 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PHOX2BQ99453 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PHOX2BQ99453 AC098799.1-201ENST00000504752 800 ntBASIC17.69■□□□□ 0.42
PHOX2BQ99453 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHOX2BQ99453 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PHOX2BQ99453 SLC25A39P2-201ENST00000537614 270 ntBASIC17.69■□□□□ 0.42
PHOX2BQ99453 AC116407.2-201ENST00000613639 860 ntBASIC17.69■□□□□ 0.42
PHOX2BQ99453 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PHOX2BQ99453 AL589182.2-201ENST00000619332 1049 ntBASIC17.69■□□□□ 0.42
PHOX2BQ99453 AC009154.2-201ENST00000621177 724 ntBASIC17.69■□□□□ 0.42
PHOX2BQ99453 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHOX2BQ99453 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHOX2BQ99453 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PHOX2BQ99453 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms