Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 AP000347.1-202ENST00000435868 847 ntBASIC12.84□□□□□ -0.35
MUC4Q99102 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
MUC4Q99102 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC12.84□□□□□ -0.35
MUC4Q99102 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
MUC4Q99102 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
MUC4Q99102 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
MUC4Q99102 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
MUC4Q99102 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
MUC4Q99102 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
MUC4Q99102 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.83□□□□□ -0.36
MUC4Q99102 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
MUC4Q99102 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
MUC4Q99102 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.83□□□□□ -0.36
MUC4Q99102 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.83□□□□□ -0.36
MUC4Q99102 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC12.83□□□□□ -0.36
MUC4Q99102 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.83□□□□□ -0.36
MUC4Q99102 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
MUC4Q99102 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
MUC4Q99102 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.83□□□□□ -0.36
MUC4Q99102 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.83□□□□□ -0.36
MUC4Q99102 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.83□□□□□ -0.36
MUC4Q99102 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
MUC4Q99102 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.83□□□□□ -0.36
MUC4Q99102 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.83□□□□□ -0.36
MUC4Q99102 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.83□□□□□ -0.36
MUC4Q99102 AC112698.1-201ENST00000510299 916 ntBASIC12.83□□□□□ -0.36
MUC4Q99102 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.83□□□□□ -0.36
MUC4Q99102 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.83□□□□□ -0.36
MUC4Q99102 AC111152.3-201ENST00000569699 673 ntBASIC12.83□□□□□ -0.36
MUC4Q99102 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.83□□□□□ -0.36
MUC4Q99102 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
MUC4Q99102 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
MUC4Q99102 AL691432.3-201ENST00000621860 400 ntBASIC12.83□□□□□ -0.36
MUC4Q99102 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
MUC4Q99102 WDR6-223ENST00000627177 207 ntTSL 2 BASIC12.83□□□□□ -0.36
MUC4Q99102 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
MUC4Q99102 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MUC4Q99102 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MUC4Q99102 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
MUC4Q99102 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MUC4Q99102 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MUC4Q99102 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
MUC4Q99102 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
MUC4Q99102 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.82□□□□□ -0.36
MUC4Q99102 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MUC4Q99102 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.82□□□□□ -0.36
MUC4Q99102 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.82□□□□□ -0.36
MUC4Q99102 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MUC4Q99102 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
MUC4Q99102 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MUC4Q99102 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
MUC4Q99102 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MUC4Q99102 MIR662-201ENST00000384847 95 ntBASIC12.82□□□□□ -0.36
MUC4Q99102 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MUC4Q99102 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
MUC4Q99102 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MUC4Q99102 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.82□□□□□ -0.36
MUC4Q99102 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.82□□□□□ -0.36
MUC4Q99102 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC12.82□□□□□ -0.36
MUC4Q99102 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC12.82□□□□□ -0.36
MUC4Q99102 AL121956.5-201ENST00000625261 221 ntBASIC12.82□□□□□ -0.36
MUC4Q99102 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MUC4Q99102 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
MUC4Q99102 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MUC4Q99102 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
MUC4Q99102 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
MUC4Q99102 LINC01311-201ENST00000565162 1445 ntBASIC12.82□□□□□ -0.36
MUC4Q99102 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
MUC4Q99102 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.82□□□□□ -0.36
MUC4Q99102 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms