Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 AC148477.5-201ENST00000625164 1645 ntBASIC18.2■□□□□ 0.5
CDK5RAP1Q96SZ6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 AC120114.3-201ENST00000611923 658 ntBASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 AL139327.4-201ENST00000612362 153 ntBASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 MIR1199-201ENST00000621445 119 ntBASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 IL9RP2-201ENST00000423948 1312 ntBASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CDK5RAP1Q96SZ6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 LINC00304-203ENST00000565008 1864 ntBASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.18■□□□□ 0.5
CDK5RAP1Q96SZ6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 AC004817.3-201ENST00000602957 2129 ntBASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 NOC2LP1-202ENST00000452600 2235 ntBASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 AL022342.1-201ENST00000400363 863 ntBASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.17■□□□□ 0.5
CDK5RAP1Q96SZ6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms