Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RAB40CQ96S21 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB40CQ96S21 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RAB40CQ96S21 FAM197Y1-201ENST00000421178 764 ntBASIC14.26□□□□□ -0.13
RAB40CQ96S21 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.26□□□□□ -0.13
RAB40CQ96S21 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.26□□□□□ -0.13
RAB40CQ96S21 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.26□□□□□ -0.13
RAB40CQ96S21 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RAB40CQ96S21 FLJ38576-201ENST00000623820 2459 ntBASIC14.26□□□□□ -0.13
RAB40CQ96S21 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RAB40CQ96S21 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB40CQ96S21 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB40CQ96S21 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
RAB40CQ96S21 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB40CQ96S21 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40CQ96S21 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40CQ96S21 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40CQ96S21 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40CQ96S21 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40CQ96S21 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40CQ96S21 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 LYSMD4-203ENST00000378904 2122 ntBASIC14.25□□□□□ -0.13
RAB40CQ96S21 RPS2P55-201ENST00000397318 883 ntBASIC14.25□□□□□ -0.13
RAB40CQ96S21 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 CRYGFP-201ENST00000418459 633 ntBASIC14.25□□□□□ -0.13
RAB40CQ96S21 TSPY17P-201ENST00000450329 467 ntBASIC14.25□□□□□ -0.13
RAB40CQ96S21 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 AC107956.1-201ENST00000494359 873 ntBASIC14.25□□□□□ -0.13
RAB40CQ96S21 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40CQ96S21 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.25□□□□□ -0.13
RAB40CQ96S21 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.25□□□□□ -0.13
RAB40CQ96S21 AP006294.2-201ENST00000641667 209 ntBASIC14.25□□□□□ -0.13
RAB40CQ96S21 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40CQ96S21 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40CQ96S21 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40CQ96S21 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40CQ96S21 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40CQ96S21 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40CQ96S21 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40CQ96S21 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40CQ96S21 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RAB40CQ96S21 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40CQ96S21 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB40CQ96S21 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40CQ96S21 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RAB40CQ96S21 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40CQ96S21 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 PCDH8P1-201ENST00000428983 2773 ntBASIC14.24□□□□□ -0.13
RAB40CQ96S21 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40CQ96S21 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAB40CQ96S21 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
RAB40CQ96S21 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB40CQ96S21 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RAB40CQ96S21 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.24□□□□□ -0.13
RAB40CQ96S21 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB40CQ96S21 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB40CQ96S21 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB40CQ96S21 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms