Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNX18Q96RF0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.04■□□□□ 0.16
SNX18Q96RF0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNX18Q96RF0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNX18Q96RF0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.04■□□□□ 0.16
SNX18Q96RF0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX18Q96RF0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX18Q96RF0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SNX18Q96RF0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.04■□□□□ 0.16
SNX18Q96RF0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.04■□□□□ 0.16
SNX18Q96RF0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
SNX18Q96RF0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.04■□□□□ 0.16
SNX18Q96RF0 LINC01238-205ENST00000567549 1107 ntBASIC16.04■□□□□ 0.16
SNX18Q96RF0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.04■□□□□ 0.16
SNX18Q96RF0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
SNX18Q96RF0 AC139887.4-201ENST00000607877 719 ntBASIC16.04■□□□□ 0.16
SNX18Q96RF0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.04■□□□□ 0.16
SNX18Q96RF0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.04■□□□□ 0.16
SNX18Q96RF0 AL138966.2-201ENST00000621997 464 ntBASIC16.04■□□□□ 0.16
SNX18Q96RF0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNX18Q96RF0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.04■□□□□ 0.16
SNX18Q96RF0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNX18Q96RF0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX18Q96RF0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
SNX18Q96RF0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.04■□□□□ 0.16
SNX18Q96RF0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.04■□□□□ 0.16
SNX18Q96RF0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.04■□□□□ 0.16
SNX18Q96RF0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SNX18Q96RF0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNX18Q96RF0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
SNX18Q96RF0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SNX18Q96RF0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNX18Q96RF0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX18Q96RF0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNX18Q96RF0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX18Q96RF0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX18Q96RF0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX18Q96RF0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNX18Q96RF0 AC117947.1-201ENST00000427448 529 ntBASIC16.03■□□□□ 0.16
SNX18Q96RF0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 AC022616.7-201ENST00000525383 220 ntBASIC16.03■□□□□ 0.16
SNX18Q96RF0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX18Q96RF0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX18Q96RF0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX18Q96RF0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNX18Q96RF0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX18Q96RF0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX18Q96RF0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SNX18Q96RF0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX18Q96RF0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX18Q96RF0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SNX18Q96RF0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.03■□□□□ 0.16
SNX18Q96RF0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SNX18Q96RF0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.02■□□□□ 0.16
SNX18Q96RF0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
SNX18Q96RF0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNX18Q96RF0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SNX18Q96RF0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SNX18Q96RF0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNX18Q96RF0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.02■□□□□ 0.16
SNX18Q96RF0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.02■□□□□ 0.16
SNX18Q96RF0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.02■□□□□ 0.16
SNX18Q96RF0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNX18Q96RF0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.02■□□□□ 0.16
SNX18Q96RF0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNX18Q96RF0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNX18Q96RF0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SNX18Q96RF0 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.02■□□□□ 0.16
SNX18Q96RF0 KRT18P65-201ENST00000439811 1286 ntBASIC16.02■□□□□ 0.16
SNX18Q96RF0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SNX18Q96RF0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SNX18Q96RF0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.02■□□□□ 0.16
SNX18Q96RF0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.02■□□□□ 0.16
SNX18Q96RF0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.02■□□□□ 0.16
SNX18Q96RF0 AC024563.2-201ENST00000603282 481 ntBASIC16.02■□□□□ 0.16
SNX18Q96RF0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.02■□□□□ 0.16
SNX18Q96RF0 AL031432.5-201ENST00000641059 760 ntBASIC16.02■□□□□ 0.16
SNX18Q96RF0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
SNX18Q96RF0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms