Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 STK19B-204ENST00000512515 211 ntBASIC14.59□□□□□ -0.07
GAFA1Q96PS6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 LINC01711-201ENST00000598340 967 ntBASIC14.59□□□□□ -0.07
GAFA1Q96PS6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
GAFA1Q96PS6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
GAFA1Q96PS6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GAFA1Q96PS6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.58□□□□□ -0.07
GAFA1Q96PS6 AP005117.1-201ENST00000584346 1413 ntBASIC14.58□□□□□ -0.07
GAFA1Q96PS6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
GAFA1Q96PS6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GAFA1Q96PS6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 AKR1C7P-201ENST00000305623 895 ntBASIC14.58□□□□□ -0.08
GAFA1Q96PS6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 UNC93B7-201ENST00000509439 705 ntBASIC14.58□□□□□ -0.08
GAFA1Q96PS6 AC106795.1-205ENST00000512851 1056 ntBASIC14.58□□□□□ -0.08
GAFA1Q96PS6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 REXO1L6P-202ENST00000619970 1078 ntBASIC14.58□□□□□ -0.08
GAFA1Q96PS6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 AC009336.1-201ENST00000608941 1553 ntBASIC14.58□□□□□ -0.08
GAFA1Q96PS6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
GAFA1Q96PS6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 AC046185.3-201ENST00000623228 1824 ntBASIC14.57□□□□□ -0.08
GAFA1Q96PS6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 PP12613-201ENST00000424958 2230 ntBASIC14.57□□□□□ -0.08
GAFA1Q96PS6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 RBM17P3-201ENST00000417687 1192 ntBASIC14.57□□□□□ -0.08
GAFA1Q96PS6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.57□□□□□ -0.08
GAFA1Q96PS6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms