Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 GNAS-203ENST00000306120 1878 ntBASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 NOC2LP2-201ENST00000407594 1944 ntBASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 AC134043.2-201ENST00000624206 2238 ntBASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
SMARCD1Q96GM5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 RNF165-205ENST00000588679 2904 ntBASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMARCD1Q96GM5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 AL589182.2-201ENST00000619332 1049 ntBASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 AC008735.5-201ENST00000623544 497 ntBASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 AC046185.3-201ENST00000623228 1824 ntBASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 AC090340.1-201ENST00000620778 4980 ntBASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 AC018470.1-201ENST00000624790 3129 ntBASIC18.43■□□□□ 0.54
SMARCD1Q96GM5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 NCF1C-201ENST00000438382 1427 ntBASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCD1Q96GM5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms