Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.3■□□□□ 0.04
CPNE2Q96FN4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 LINC01568-207ENST00000641790 1380 ntBASIC15.3■□□□□ 0.04
CPNE2Q96FN4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
CPNE2Q96FN4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 AL645608.8-201ENST00000606034 2086 ntBASIC15.29■□□□□ 0.04
CPNE2Q96FN4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 INGX-201ENST00000359239 846 ntBASIC15.29■□□□□ 0.04
CPNE2Q96FN4 FAM8A6P-201ENST00000407496 1135 ntBASIC15.29■□□□□ 0.04
CPNE2Q96FN4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 AC009154.2-201ENST00000621177 724 ntBASIC15.29■□□□□ 0.04
CPNE2Q96FN4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 FLJ16779-201ENST00000612722 7638 ntBASIC15.29■□□□□ 0.04
CPNE2Q96FN4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CPNE2Q96FN4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 BX276092.7-203ENST00000637198 1536 ntBASIC15.28■□□□□ 0.04
CPNE2Q96FN4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 AC141257.4-201ENST00000634557 245 ntBASIC15.28■□□□□ 0.04
CPNE2Q96FN4 AC136944.6-201ENST00000634818 245 ntBASIC15.28■□□□□ 0.04
CPNE2Q96FN4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 AD000864.1-201ENST00000624076 2295 ntBASIC15.28■□□□□ 0.04
CPNE2Q96FN4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CPNE2Q96FN4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms