Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
PTP4A1Q93096 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.79■□□□□ 0.12
PTP4A1Q93096 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.79■□□□□ 0.12
PTP4A1Q93096 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.79■□□□□ 0.12
PTP4A1Q93096 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
PTP4A1Q93096 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.79■□□□□ 0.12
PTP4A1Q93096 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.79■□□□□ 0.12
PTP4A1Q93096 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 AC116353.5-201ENST00000638148 1699 ntBASIC15.79■□□□□ 0.12
PTP4A1Q93096 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.79■□□□□ 0.12
PTP4A1Q93096 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
PTP4A1Q93096 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTP4A1Q93096 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.78■□□□□ 0.12
PTP4A1Q93096 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PTP4A1Q93096 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.78■□□□□ 0.12
PTP4A1Q93096 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 LINC01311-201ENST00000565162 1445 ntBASIC15.78■□□□□ 0.12
PTP4A1Q93096 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.78■□□□□ 0.12
PTP4A1Q93096 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PTP4A1Q93096 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PTP4A1Q93096 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PTP4A1Q93096 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.78■□□□□ 0.12
PTP4A1Q93096 STARP1-201ENST00000397973 869 ntBASIC15.78■□□□□ 0.12
PTP4A1Q93096 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PTP4A1Q93096 TMPOP1-202ENST00000424642 1267 ntBASIC15.78■□□□□ 0.12
PTP4A1Q93096 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.78■□□□□ 0.12
PTP4A1Q93096 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.78■□□□□ 0.12
PTP4A1Q93096 RN7SL850P-201ENST00000579959 291 ntBASIC15.78■□□□□ 0.12
PTP4A1Q93096 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.78■□□□□ 0.12
PTP4A1Q93096 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
PTP4A1Q93096 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PTP4A1Q93096 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.78■□□□□ 0.12
PTP4A1Q93096 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PTP4A1Q93096 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PTP4A1Q93096 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.78■□□□□ 0.12
PTP4A1Q93096 OR6D1P-202ENST00000641007 5290 ntBASIC15.78■□□□□ 0.12
PTP4A1Q93096 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTP4A1Q93096 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.77■□□□□ 0.12
PTP4A1Q93096 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PTP4A1Q93096 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTP4A1Q93096 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTP4A1Q93096 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTP4A1Q93096 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PTP4A1Q93096 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTP4A1Q93096 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.77■□□□□ 0.12
PTP4A1Q93096 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
PTP4A1Q93096 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.12
PTP4A1Q93096 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.77■□□□□ 0.12
PTP4A1Q93096 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTP4A1Q93096 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTP4A1Q93096 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTP4A1Q93096 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTP4A1Q93096 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTP4A1Q93096 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.77■□□□□ 0.12
PTP4A1Q93096 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTP4A1Q93096 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PTP4A1Q93096 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.77■□□□□ 0.12
PTP4A1Q93096 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.77■□□□□ 0.12
PTP4A1Q93096 AC006011.2-201ENST00000621313 1158 ntBASIC15.77■□□□□ 0.12
PTP4A1Q93096 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.77■□□□□ 0.12
PTP4A1Q93096 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.77■□□□□ 0.11
PTP4A1Q93096 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PTP4A1Q93096 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PTP4A1Q93096 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
PTP4A1Q93096 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms