Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
USP9XQ93008 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.14■□□□□ 0.01
USP9XQ93008 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.14■□□□□ 0.01
USP9XQ93008 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
USP9XQ93008 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
USP9XQ93008 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
USP9XQ93008 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
USP9XQ93008 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.14■□□□□ 0.01
USP9XQ93008 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
USP9XQ93008 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
USP9XQ93008 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
USP9XQ93008 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.14■□□□□ 0.01
USP9XQ93008 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.14■□□□□ 0.01
USP9XQ93008 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
USP9XQ93008 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
USP9XQ93008 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
USP9XQ93008 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.14■□□□□ 0.01
USP9XQ93008 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.14■□□□□ 0.01
USP9XQ93008 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.14■□□□□ 0.01
USP9XQ93008 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.14■□□□□ 0.01
USP9XQ93008 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
USP9XQ93008 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.14■□□□□ 0.01
USP9XQ93008 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
USP9XQ93008 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
USP9XQ93008 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
USP9XQ93008 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.13■□□□□ 0.01
USP9XQ93008 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.13■□□□□ 0.01
USP9XQ93008 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
USP9XQ93008 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.13■□□□□ 0.01
USP9XQ93008 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
USP9XQ93008 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.13■□□□□ 0.01
USP9XQ93008 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.13■□□□□ 0.01
USP9XQ93008 AL512384.1-201ENST00000406683 331 ntBASIC15.13■□□□□ 0.01
USP9XQ93008 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
USP9XQ93008 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.13■□□□□ 0.01
USP9XQ93008 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.13■□□□□ 0.01
USP9XQ93008 AC092658.1-201ENST00000505836 891 ntBASIC15.13■□□□□ 0.01
USP9XQ93008 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.13■□□□□ 0.01
USP9XQ93008 KRT8P23-201ENST00000560090 1207 ntBASIC15.13■□□□□ 0.01
USP9XQ93008 AP000842.3-202ENST00000569238 1080 ntBASIC15.13■□□□□ 0.01
USP9XQ93008 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.13■□□□□ 0.01
USP9XQ93008 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
USP9XQ93008 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
USP9XQ93008 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.13■□□□□ 0.01
USP9XQ93008 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
USP9XQ93008 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.13■□□□□ 0.01
USP9XQ93008 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
USP9XQ93008 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
USP9XQ93008 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
USP9XQ93008 DGCR5-201ENST00000399539 862 ntBASIC15.13■□□□□ 0.01
USP9XQ93008 AC092506.1-202ENST00000401022 528 ntBASIC15.13■□□□□ 0.01
USP9XQ93008 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.13■□□□□ 0.01
USP9XQ93008 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.13■□□□□ 0.01
USP9XQ93008 RARRES2P8-201ENST00000566335 367 ntBASIC15.13■□□□□ 0.01
USP9XQ93008 AC132938.2-201ENST00000579188 680 ntBASIC15.13■□□□□ 0.01
USP9XQ93008 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
USP9XQ93008 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.13■□□□□ 0.01
USP9XQ93008 AL591163.1-201ENST00000641757 987 ntBASIC15.13■□□□□ 0.01
USP9XQ93008 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.13■□□□□ 0.01
USP9XQ93008 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.13■□□□□ 0.01
USP9XQ93008 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.13■□□□□ 0.01
USP9XQ93008 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
USP9XQ93008 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
USP9XQ93008 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP9XQ93008 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP9XQ93008 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.12■□□□□ 0.01
USP9XQ93008 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.12■□□□□ 0.01
USP9XQ93008 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP9XQ93008 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP9XQ93008 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
USP9XQ93008 KRT17P7-201ENST00000451704 1104 ntBASIC15.12■□□□□ 0.01
USP9XQ93008 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.12■□□□□ 0.01
USP9XQ93008 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.12■□□□□ 0.01
USP9XQ93008 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.12■□□□□ 0.01
USP9XQ93008 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.12■□□□□ 0.01
USP9XQ93008 AL138828.2-201ENST00000615812 383 ntBASIC15.12■□□□□ 0.01
USP9XQ93008 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.12■□□□□ 0.01
USP9XQ93008 AC138969.3-201ENST00000546612 1459 ntBASIC15.12■□□□□ 0.01
USP9XQ93008 AC138932.2-201ENST00000548268 1459 ntBASIC15.12■□□□□ 0.01
USP9XQ93008 AC126755.4-201ENST00000549796 1459 ntBASIC15.12■□□□□ 0.01
USP9XQ93008 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP9XQ93008 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP9XQ93008 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
USP9XQ93008 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
USP9XQ93008 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.12■□□□□ 0.01
USP9XQ93008 AC129492.6-201ENST00000611383 1305 ntBASIC15.12■□□□□ 0.01
USP9XQ93008 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
USP9XQ93008 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.12■□□□□ 0.01
USP9XQ93008 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
USP9XQ93008 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.12■□□□□ 0.01
USP9XQ93008 AC109462.3-201ENST00000573934 613 ntBASIC15.12■□□□□ 0.01
USP9XQ93008 MIR6787-201ENST00000616675 61 ntBASIC15.12■□□□□ 0.01
USP9XQ93008 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
USP9XQ93008 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
USP9XQ93008 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
USP9XQ93008 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.11■□□□□ 0.01
USP9XQ93008 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
USP9XQ93008 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
USP9XQ93008 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
USP9XQ93008 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms