Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC1Q92922 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC22.28■■□□□ 1.16
SMARCC1Q92922 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC22.28■■□□□ 1.16
SMARCC1Q92922 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC1Q92922 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC1Q92922 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC1Q92922 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SMARCC1Q92922 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
SMARCC1Q92922 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC1Q92922 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC22.27■■□□□ 1.16
SMARCC1Q92922 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC22.27■■□□□ 1.16
SMARCC1Q92922 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC1Q92922 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC1Q92922 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC1Q92922 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC1Q92922 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC22.27■■□□□ 1.16
SMARCC1Q92922 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC22.27■■□□□ 1.16
SMARCC1Q92922 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC22.27■■□□□ 1.16
SMARCC1Q92922 CNN2P2-201ENST00000443536 909 ntBASIC22.27■■□□□ 1.16
SMARCC1Q92922 CNN2P3-201ENST00000450201 906 ntBASIC22.27■■□□□ 1.16
SMARCC1Q92922 SLC25A6P2-201ENST00000497974 877 ntBASIC22.27■■□□□ 1.16
SMARCC1Q92922 AC093214.1-201ENST00000511688 1107 ntBASIC22.27■■□□□ 1.16
SMARCC1Q92922 KRT8P48-201ENST00000515599 1220 ntBASIC22.27■■□□□ 1.16
SMARCC1Q92922 AL136317.3-201ENST00000618497 906 ntBASIC22.27■■□□□ 1.16
SMARCC1Q92922 AL645728.2-201ENST00000641974 660 ntBASIC22.27■■□□□ 1.16
SMARCC1Q92922 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC1Q92922 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC1Q92922 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC1Q92922 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
SMARCC1Q92922 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC22.27■■□□□ 1.16
SMARCC1Q92922 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SMARCC1Q92922 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
SMARCC1Q92922 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC1Q92922 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC1Q92922 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC1Q92922 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC22.27■■□□□ 1.16
SMARCC1Q92922 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SMARCC1Q92922 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC1Q92922 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
SMARCC1Q92922 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC1Q92922 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC1Q92922 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC1Q92922 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
SMARCC1Q92922 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC1Q92922 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC22.26■■□□□ 1.15
SMARCC1Q92922 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC22.26■■□□□ 1.15
SMARCC1Q92922 AL512356.2-201ENST00000546955 174 ntBASIC22.26■■□□□ 1.15
SMARCC1Q92922 VPS29-207ENST00000549970 818 ntTSL 3 BASIC22.26■■□□□ 1.15
SMARCC1Q92922 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC22.26■■□□□ 1.15
SMARCC1Q92922 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC22.26■■□□□ 1.15
SMARCC1Q92922 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC1Q92922 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC1Q92922 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC1Q92922 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
SMARCC1Q92922 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
SMARCC1Q92922 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC1Q92922 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC1Q92922 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC1Q92922 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.25■■□□□ 1.15
SMARCC1Q92922 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC1Q92922 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
SMARCC1Q92922 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC1Q92922 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC22.25■■□□□ 1.15
SMARCC1Q92922 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC1Q92922 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC1Q92922 KLK8-202ENST00000320838 456 ntTSL 5 BASIC22.25■■□□□ 1.15
SMARCC1Q92922 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC22.25■■□□□ 1.15
SMARCC1Q92922 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC22.25■■□□□ 1.15
SMARCC1Q92922 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC1Q92922 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC1Q92922 AL592309.1-201ENST00000443127 649 ntBASIC22.25■■□□□ 1.15
SMARCC1Q92922 AC087163.2-201ENST00000457299 853 ntBASIC22.25■■□□□ 1.15
SMARCC1Q92922 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC22.25■■□□□ 1.15
SMARCC1Q92922 RN7SL589P-201ENST00000481268 310 ntBASIC22.25■■□□□ 1.15
SMARCC1Q92922 INGX-202ENST00000489074 768 ntBASIC22.25■■□□□ 1.15
SMARCC1Q92922 AC069335.1-201ENST00000489972 472 ntBASIC22.25■■□□□ 1.15
SMARCC1Q92922 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC22.25■■□□□ 1.15
SMARCC1Q92922 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC22.25■■□□□ 1.15
SMARCC1Q92922 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC1Q92922 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC1Q92922 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC22.25■■□□□ 1.15
SMARCC1Q92922 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC22.25■■□□□ 1.15
SMARCC1Q92922 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC1Q92922 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC22.25■■□□□ 1.15
SMARCC1Q92922 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC22.25■■□□□ 1.15
SMARCC1Q92922 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC1Q92922 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC22.25■■□□□ 1.15
SMARCC1Q92922 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.25■■□□□ 1.15
SMARCC1Q92922 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SMARCC1Q92922 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SMARCC1Q92922 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC1Q92922 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC1Q92922 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC22.24■■□□□ 1.15
SMARCC1Q92922 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC1Q92922 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SMARCC1Q92922 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
SMARCC1Q92922 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
SMARCC1Q92922 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.24■■□□□ 1.15
SMARCC1Q92922 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.24■■□□□ 1.15
SMARCC1Q92922 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms