Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.86■□□□□ 0.61
SEMA4DQ92854 AL591684.3-201ENST00000605187 298 ntBASIC18.86■□□□□ 0.61
SEMA4DQ92854 AL732292.2-201ENST00000609649 430 ntBASIC18.86■□□□□ 0.61
SEMA4DQ92854 AC073592.5-201ENST00000624854 528 ntBASIC18.86■□□□□ 0.61
SEMA4DQ92854 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.86■□□□□ 0.61
SEMA4DQ92854 AP000867.4-201ENST00000641616 219 ntBASIC18.86■□□□□ 0.61
SEMA4DQ92854 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
SEMA4DQ92854 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.86■□□□□ 0.61
SEMA4DQ92854 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA4DQ92854 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA4DQ92854 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA4DQ92854 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA4DQ92854 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA4DQ92854 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA4DQ92854 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA4DQ92854 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SEMA4DQ92854 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.86■□□□□ 0.61
SEMA4DQ92854 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA4DQ92854 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA4DQ92854 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SEMA4DQ92854 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA4DQ92854 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA4DQ92854 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA4DQ92854 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA4DQ92854 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.85■□□□□ 0.61
SEMA4DQ92854 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
SEMA4DQ92854 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.85■□□□□ 0.61
SEMA4DQ92854 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SEMA4DQ92854 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SEMA4DQ92854 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA4DQ92854 MYCLP1-201ENST00000372451 1075 ntBASIC18.85■□□□□ 0.61
SEMA4DQ92854 AC132008.2-207ENST00000454517 770 ntBASIC18.85■□□□□ 0.61
SEMA4DQ92854 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA4DQ92854 AC111152.3-201ENST00000569699 673 ntBASIC18.85■□□□□ 0.61
SEMA4DQ92854 CLEC4GP1-201ENST00000596555 870 ntBASIC18.85■□□□□ 0.61
SEMA4DQ92854 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.85■□□□□ 0.61
SEMA4DQ92854 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.85■□□□□ 0.61
SEMA4DQ92854 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA4DQ92854 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA4DQ92854 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA4DQ92854 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA4DQ92854 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
SEMA4DQ92854 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA4DQ92854 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA4DQ92854 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA4DQ92854 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.84■□□□□ 0.61
SEMA4DQ92854 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA4DQ92854 LTB4R2-202ENST00000528054 3092 ntBASIC18.84■□□□□ 0.61
SEMA4DQ92854 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SEMA4DQ92854 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA4DQ92854 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA4DQ92854 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA4DQ92854 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA4DQ92854 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA4DQ92854 TSPY19P-201ENST00000418461 509 ntBASIC18.84■□□□□ 0.61
SEMA4DQ92854 TSPY18P-201ENST00000441642 509 ntBASIC18.84■□□□□ 0.61
SEMA4DQ92854 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.84■□□□□ 0.61
SEMA4DQ92854 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.84■□□□□ 0.61
SEMA4DQ92854 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.84■□□□□ 0.61
SEMA4DQ92854 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.84■□□□□ 0.61
SEMA4DQ92854 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SEMA4DQ92854 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SEMA4DQ92854 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA4DQ92854 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SEMA4DQ92854 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA4DQ92854 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
SEMA4DQ92854 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SEMA4DQ92854 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA4DQ92854 AC046185.3-201ENST00000623228 1824 ntBASIC18.84■□□□□ 0.61
SEMA4DQ92854 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.83■□□□□ 0.61
SEMA4DQ92854 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SEMA4DQ92854 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SEMA4DQ92854 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.83■□□□□ 0.61
SEMA4DQ92854 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.61
SEMA4DQ92854 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SEMA4DQ92854 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4DQ92854 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4DQ92854 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4DQ92854 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4DQ92854 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
SEMA4DQ92854 SLC25A1P3-201ENST00000395415 828 ntBASIC18.83■□□□□ 0.6
SEMA4DQ92854 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.83■□□□□ 0.6
SEMA4DQ92854 ABCD1P5-201ENST00000445663 754 ntBASIC18.83■□□□□ 0.6
SEMA4DQ92854 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SEMA4DQ92854 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.83■□□□□ 0.6
SEMA4DQ92854 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.83■□□□□ 0.6
SEMA4DQ92854 KRT18P31-201ENST00000506277 1292 ntBASIC18.83■□□□□ 0.6
SEMA4DQ92854 KRT18P56-201ENST00000507275 550 ntBASIC18.83■□□□□ 0.6
SEMA4DQ92854 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.83■□□□□ 0.6
SEMA4DQ92854 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.83■□□□□ 0.6
SEMA4DQ92854 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4DQ92854 AP001269.4-201ENST00000609611 512 ntBASIC18.83■□□□□ 0.6
SEMA4DQ92854 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SEMA4DQ92854 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SEMA4DQ92854 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4DQ92854 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.83■□□□□ 0.6
SEMA4DQ92854 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4DQ92854 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4DQ92854 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEMA4DQ92854 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms