Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
HERVK_113Q902F9 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERVK_113Q902F9 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HERVK_113Q902F9 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.7■□□□□ 0.58
HERVK_113Q902F9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERVK_113Q902F9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.7■□□□□ 0.58
HERVK_113Q902F9 RBPMS2P1-201ENST00000437762 623 ntBASIC18.7■□□□□ 0.58
HERVK_113Q902F9 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.7■□□□□ 0.58
HERVK_113Q902F9 SLC25A6P2-201ENST00000497974 877 ntBASIC18.7■□□□□ 0.58
HERVK_113Q902F9 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.7■□□□□ 0.58
HERVK_113Q902F9 AP005018.1-201ENST00000525475 301 ntBASIC18.7■□□□□ 0.58
HERVK_113Q902F9 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERVK_113Q902F9 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERVK_113Q902F9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.7■□□□□ 0.58
HERVK_113Q902F9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERVK_113Q902F9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERVK_113Q902F9 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERVK_113Q902F9 AKAP8P1-201ENST00000434743 1349 ntBASIC18.7■□□□□ 0.58
HERVK_113Q902F9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HERVK_113Q902F9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HERVK_113Q902F9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 TREML5P-201ENST00000421694 576 ntBASIC18.69■□□□□ 0.58
HERVK_113Q902F9 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 AC007274.1-201ENST00000439805 662 ntBASIC18.69■□□□□ 0.58
HERVK_113Q902F9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 DUX4L17-201ENST00000557360 1267 ntBASIC18.69■□□□□ 0.58
HERVK_113Q902F9 AL135744.1-201ENST00000565098 629 ntBASIC18.69■□□□□ 0.58
HERVK_113Q902F9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.69■□□□□ 0.58
HERVK_113Q902F9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HERVK_113Q902F9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 AC009949.1-201ENST00000623048 1830 ntBASIC18.68■□□□□ 0.58
HERVK_113Q902F9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 HLA-V-201ENST00000429037 534 ntBASIC18.68■□□□□ 0.58
HERVK_113Q902F9 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 CR383656.12-201ENST00000549567 513 ntBASIC18.68■□□□□ 0.58
HERVK_113Q902F9 RARRES2P8-201ENST00000566335 367 ntBASIC18.68■□□□□ 0.58
HERVK_113Q902F9 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 AL008721.1-201ENST00000609964 604 ntBASIC18.68■□□□□ 0.58
HERVK_113Q902F9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HERVK_113Q902F9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 AC087163.2-201ENST00000457299 853 ntBASIC18.67■□□□□ 0.58
HERVK_113Q902F9 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 MEIS3P1-201ENST00000495167 958 ntBASIC18.67■□□□□ 0.58
HERVK_113Q902F9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HERVK_113Q902F9 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms