Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATL1Q8WXF7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 MYCLP1-201ENST00000372451 1075 ntBASIC17.16■□□□□ 0.34
ATL1Q8WXF7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.16■□□□□ 0.34
ATL1Q8WXF7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 AC233702.3-201ENST00000578656 1387 ntBASIC17.15■□□□□ 0.34
ATL1Q8WXF7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 AC103564.2-201ENST00000432853 1299 ntBASIC17.15■□□□□ 0.34
ATL1Q8WXF7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 AP002414.4-201ENST00000589764 1148 ntBASIC17.15■□□□□ 0.34
ATL1Q8WXF7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.15■□□□□ 0.34
ATL1Q8WXF7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ATL1Q8WXF7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
ATL1Q8WXF7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
ATL1Q8WXF7 OR6D1P-203ENST00000641209 4860 ntBASIC17.14■□□□□ 0.33
ATL1Q8WXF7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 IGHV3-52-201ENST00000519770 353 ntBASIC17.14■□□□□ 0.33
ATL1Q8WXF7 TPSP2-201ENST00000561760 610 ntBASIC17.14■□□□□ 0.33
ATL1Q8WXF7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ATL1Q8WXF7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms