Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.64■□□□□ 0.9
STAG1Q8WVM7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.64■□□□□ 0.9
STAG1Q8WVM7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
STAG1Q8WVM7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
STAG1Q8WVM7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
STAG1Q8WVM7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
STAG1Q8WVM7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
STAG1Q8WVM7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 SIGLEC30P-201ENST00000455569 941 ntBASIC20.64■□□□□ 0.89
STAG1Q8WVM7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
STAG1Q8WVM7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 AL031284.1-201ENST00000419297 478 ntBASIC20.63■□□□□ 0.89
STAG1Q8WVM7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 MTDHP4-201ENST00000600287 670 ntBASIC20.63■□□□□ 0.89
STAG1Q8WVM7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
STAG1Q8WVM7 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 AC073648.2-201ENST00000510116 352 ntBASIC20.62■□□□□ 0.89
STAG1Q8WVM7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
STAG1Q8WVM7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 AL022342.1-201ENST00000400363 863 ntBASIC20.61■□□□□ 0.89
STAG1Q8WVM7 HNRNPDP1-201ENST00000439535 754 ntBASIC20.61■□□□□ 0.89
STAG1Q8WVM7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 BX640515.1-201ENST00000617215 977 ntBASIC20.61■□□□□ 0.89
STAG1Q8WVM7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
STAG1Q8WVM7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms