Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 TSPY19P-201ENST00000418461 509 ntBASIC17.79■□□□□ 0.44
PTCD2Q8WV60 TSPY18P-201ENST00000441642 509 ntBASIC17.79■□□□□ 0.44
PTCD2Q8WV60 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 AC002558.1-201ENST00000488906 803 ntBASIC17.79■□□□□ 0.44
PTCD2Q8WV60 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 Z69720.1-201ENST00000601483 472 ntBASIC17.79■□□□□ 0.44
PTCD2Q8WV60 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PTCD2Q8WV60 AC108860.2-201ENST00000562760 2183 ntBASIC17.79■□□□□ 0.44
PTCD2Q8WV60 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 COX5BP2-201ENST00000392354 334 ntBASIC17.78■□□□□ 0.44
PTCD2Q8WV60 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 AC011840.4-201ENST00000578471 627 ntBASIC17.78■□□□□ 0.44
PTCD2Q8WV60 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 AC016396.2-201ENST00000562575 1417 ntBASIC17.78■□□□□ 0.44
PTCD2Q8WV60 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PTCD2Q8WV60 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 RN7SL510P-201ENST00000581311 263 ntBASIC17.77■□□□□ 0.44
PTCD2Q8WV60 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 BNIP3P18-201ENST00000593976 575 ntBASIC17.77■□□□□ 0.44
PTCD2Q8WV60 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 IFNL4P1-201ENST00000607083 540 ntBASIC17.77■□□□□ 0.44
PTCD2Q8WV60 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PTCD2Q8WV60 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.77■□□□□ 0.43
PTCD2Q8WV60 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PTCD2Q8WV60 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTCD2Q8WV60 CROCCP2-202ENST00000412962 2773 ntBASIC17.77■□□□□ 0.43
PTCD2Q8WV60 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PTCD2Q8WV60 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.77■□□□□ 0.43
PTCD2Q8WV60 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTCD2Q8WV60 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PTCD2Q8WV60 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms