Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CT55Q8WUE5 PI4KAP1-204ENST00000612579 1703 ntBASIC16.28■□□□□ 0.2
CT55Q8WUE5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CT55Q8WUE5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CT55Q8WUE5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CT55Q8WUE5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.28■□□□□ 0.2
CT55Q8WUE5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CT55Q8WUE5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CT55Q8WUE5 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CT55Q8WUE5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CT55Q8WUE5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CT55Q8WUE5 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CT55Q8WUE5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CT55Q8WUE5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CT55Q8WUE5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.28■□□□□ 0.2
CT55Q8WUE5 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.28■□□□□ 0.2
CT55Q8WUE5 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.28■□□□□ 0.2
CT55Q8WUE5 KRT19P2-202ENST00000557173 1012 ntBASIC16.28■□□□□ 0.2
CT55Q8WUE5 PDPK2P-202ENST00000562415 1191 ntBASIC16.28■□□□□ 0.2
CT55Q8WUE5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CT55Q8WUE5 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
CT55Q8WUE5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CT55Q8WUE5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.28■□□□□ 0.2
CT55Q8WUE5 AL355385.1-201ENST00000606123 409 ntBASIC16.28■□□□□ 0.2
CT55Q8WUE5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.28■□□□□ 0.2
CT55Q8WUE5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.28■□□□□ 0.2
CT55Q8WUE5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.28■□□□□ 0.2
CT55Q8WUE5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
CT55Q8WUE5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CT55Q8WUE5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.28■□□□□ 0.2
CT55Q8WUE5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CT55Q8WUE5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.28■□□□□ 0.2
CT55Q8WUE5 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CT55Q8WUE5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CT55Q8WUE5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CT55Q8WUE5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.27■□□□□ 0.2
CT55Q8WUE5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CT55Q8WUE5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CT55Q8WUE5 KRT18P28-201ENST00000453838 1332 ntBASIC16.27■□□□□ 0.2
CT55Q8WUE5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CT55Q8WUE5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CT55Q8WUE5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.27■□□□□ 0.2
CT55Q8WUE5 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CT55Q8WUE5 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CT55Q8WUE5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CT55Q8WUE5 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CT55Q8WUE5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CT55Q8WUE5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
CT55Q8WUE5 ACTG1P4-201ENST00000425123 1122 ntBASIC16.27■□□□□ 0.2
CT55Q8WUE5 HMGN1P19-201ENST00000436976 333 ntBASIC16.27■□□□□ 0.2
CT55Q8WUE5 MKNK2P1-201ENST00000437526 628 ntBASIC16.27■□□□□ 0.2
CT55Q8WUE5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.27■□□□□ 0.2
CT55Q8WUE5 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.27■□□□□ 0.2
CT55Q8WUE5 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.27■□□□□ 0.2
CT55Q8WUE5 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.27■□□□□ 0.2
CT55Q8WUE5 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.27■□□□□ 0.2
CT55Q8WUE5 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CT55Q8WUE5 AC138932.1-201ENST00000534164 6830 ntBASIC16.27■□□□□ 0.2
CT55Q8WUE5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CT55Q8WUE5 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CT55Q8WUE5 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.27■□□□□ 0.19
CT55Q8WUE5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CT55Q8WUE5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.27■□□□□ 0.19
CT55Q8WUE5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.26■□□□□ 0.19
CT55Q8WUE5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CT55Q8WUE5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CT55Q8WUE5 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.26■□□□□ 0.19
CT55Q8WUE5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.26■□□□□ 0.19
CT55Q8WUE5 AL590787.1-201ENST00000568856 1315 ntBASIC16.26■□□□□ 0.19
CT55Q8WUE5 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CT55Q8WUE5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CT55Q8WUE5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CT55Q8WUE5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CT55Q8WUE5 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CT55Q8WUE5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CT55Q8WUE5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.26■□□□□ 0.19
CT55Q8WUE5 AC254562.1-201ENST00000417586 456 ntBASIC16.26■□□□□ 0.19
CT55Q8WUE5 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.26■□□□□ 0.19
CT55Q8WUE5 METTL21AP1-201ENST00000438852 635 ntBASIC16.26■□□□□ 0.19
CT55Q8WUE5 CEND1P1-201ENST00000451006 455 ntBASIC16.26■□□□□ 0.19
CT55Q8WUE5 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.26■□□□□ 0.19
CT55Q8WUE5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.26■□□□□ 0.19
CT55Q8WUE5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.26■□□□□ 0.19
CT55Q8WUE5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.26■□□□□ 0.19
CT55Q8WUE5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.26■□□□□ 0.19
CT55Q8WUE5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CT55Q8WUE5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CT55Q8WUE5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.26■□□□□ 0.19
CT55Q8WUE5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CT55Q8WUE5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CT55Q8WUE5 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CT55Q8WUE5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CT55Q8WUE5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CT55Q8WUE5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CT55Q8WUE5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CT55Q8WUE5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CT55Q8WUE5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CT55Q8WUE5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CT55Q8WUE5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CT55Q8WUE5 ELL2P1-201ENST00000413990 1906 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms