Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP1Q8TDR0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP1Q8TDR0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 AL049597.2-201ENST00000565575 961 ntBASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 AC011498.5-201ENST00000592027 486 ntBASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAF3IP1Q8TDR0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 AL136038.3-201ENST00000561909 1096 ntBASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 CROCCP2-202ENST00000412962 2773 ntBASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAF3IP1Q8TDR0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 SIRPAP1-201ENST00000448467 1770 ntBASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 AC108860.2-201ENST00000562760 2183 ntBASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 AL592071.1-201ENST00000611956 408 ntBASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 IGHV3-41-201ENST00000613121 348 ntBASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 AC124864.1-201ENST00000623408 392 ntBASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAF3IP1Q8TDR0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
TRAF3IP1Q8TDR0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TRAF3IP1Q8TDR0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TRAF3IP1Q8TDR0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAF3IP1Q8TDR0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAF3IP1Q8TDR0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAF3IP1Q8TDR0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAF3IP1Q8TDR0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAF3IP1Q8TDR0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAF3IP1Q8TDR0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAF3IP1Q8TDR0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAF3IP1Q8TDR0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRAF3IP1Q8TDR0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAF3IP1Q8TDR0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.29■□□□□ 0.52
TRAF3IP1Q8TDR0 AC096633.1-201ENST00000422446 749 ntBASIC18.29■□□□□ 0.52
TRAF3IP1Q8TDR0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAF3IP1Q8TDR0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TRAF3IP1Q8TDR0 AC090616.6-201ENST00000582640 721 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms