Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 Z69720.1-201ENST00000601483 472 ntBASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 KRT8P10-201ENST00000450021 1447 ntBASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 BNIP3P18-201ENST00000593976 575 ntBASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 AC016396.2-201ENST00000562575 1417 ntBASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 TP73-AS1-210ENST00000637775 1455 ntBASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 NSUN5P1-202ENST00000421140 1535 ntBASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 NSUN5P2-203ENST00000457352 1529 ntBASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH19Q8TAB3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 AC103564.2-201ENST00000432853 1299 ntBASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 IGHV3-52-201ENST00000519770 353 ntBASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 PRELID1P1-202ENST00000567272 903 ntBASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 MIR3652-201ENST00000579335 131 ntBASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH19Q8TAB3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 MYCLP1-201ENST00000372451 1075 ntBASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH19Q8TAB3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms