Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCDC168Q8NDH2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 RBPMS2P1-201ENST00000437762 623 ntBASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 KRT17P7-201ENST00000451704 1104 ntBASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 AL162274.1-201ENST00000617191 1098 ntBASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 SPDYE14P-201ENST00000442619 822 ntBASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 AC079140.1-201ENST00000508039 487 ntBASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 AC106886.1-201ENST00000568660 600 ntBASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CCDC168Q8NDH2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 PTCHD3P3-201ENST00000403073 906 ntBASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 RN7SL589P-201ENST00000481268 310 ntBASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 AC022144.1-201ENST00000602255 1580 ntBASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC168Q8NDH2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC168Q8NDH2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms