Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 PDPK2P-202ENST00000562415 1191 ntBASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 AC116407.2-201ENST00000613639 860 ntBASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 AC148477.5-201ENST00000625164 1645 ntBASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 PHGDH-209ENST00000641074 1780 ntBASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SYNPOQ8N3V7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 LETM1P2-201ENST00000597330 2178 ntBASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SYNPOQ8N3V7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 AC026471.1-201ENST00000564629 3026 ntBASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 AP002414.1-201ENST00000391405 1147 ntBASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SYNPOQ8N3V7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.77■□□□□ 0.43
SYNPOQ8N3V7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SYNPOQ8N3V7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms