Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 AC141257.4-201ENST00000634557 245 ntBASIC17.57■□□□□ 0.4
CRLF3Q8IUI8 AC136944.6-201ENST00000634818 245 ntBASIC17.57■□□□□ 0.4
CRLF3Q8IUI8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
CRLF3Q8IUI8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRLF3Q8IUI8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CRLF3Q8IUI8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRLF3Q8IUI8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRLF3Q8IUI8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRLF3Q8IUI8 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRLF3Q8IUI8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRLF3Q8IUI8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 UBALD1-205ENST00000590891 2641 ntBASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CRLF3Q8IUI8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 COX11P1-201ENST00000489116 835 ntBASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.55■□□□□ 0.4
CRLF3Q8IUI8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 YBX1P2-201ENST00000489612 999 ntBASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 AC112497.1-201ENST00000624824 639 ntBASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CRLF3Q8IUI8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms