Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LRRC28Q86X40 SDHAP2-201ENST00000455183 2001 ntBASIC15.67■□□□□ 0.1
LRRC28Q86X40 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRC28Q86X40 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LRRC28Q86X40 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 CICP6-201ENST00000457191 2729 ntBASIC15.66■□□□□ 0.1
LRRC28Q86X40 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 MIR564-202ENST00000385049 94 ntBASIC15.66■□□□□ 0.1
LRRC28Q86X40 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LRRC28Q86X40 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.66■□□□□ 0.1
LRRC28Q86X40 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
LRRC28Q86X40 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRC28Q86X40 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.66■□□□□ 0.1
LRRC28Q86X40 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRC28Q86X40 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.66■□□□□ 0.1
LRRC28Q86X40 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.66■□□□□ 0.1
LRRC28Q86X40 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.66■□□□□ 0.1
LRRC28Q86X40 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LRRC28Q86X40 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LRRC28Q86X40 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LRRC28Q86X40 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LRRC28Q86X40 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.66■□□□□ 0.1
LRRC28Q86X40 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC28Q86X40 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC28Q86X40 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC28Q86X40 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC28Q86X40 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC28Q86X40 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC28Q86X40 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC28Q86X40 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC28Q86X40 AC008894.3-201ENST00000624324 3103 ntBASIC15.65■□□□□ 0.1
LRRC28Q86X40 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC28Q86X40 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC28Q86X40 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.65■□□□□ 0.1
LRRC28Q86X40 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC28Q86X40 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC28Q86X40 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC28Q86X40 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC28Q86X40 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC28Q86X40 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 AC009102.3-201ENST00000623118 1491 ntBASIC15.65■□□□□ 0.1
LRRC28Q86X40 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LRRC28Q86X40 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LRRC28Q86X40 AC034236.2-201ENST00000606662 1610 ntBASIC15.65■□□□□ 0.1
LRRC28Q86X40 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
LRRC28Q86X40 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.64■□□□□ 0.09
LRRC28Q86X40 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC28Q86X40 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC28Q86X40 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC28Q86X40 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC28Q86X40 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
LRRC28Q86X40 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC28Q86X40 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC28Q86X40 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRC28Q86X40 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC28Q86X40 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC28Q86X40 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LRRC28Q86X40 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
LRRC28Q86X40 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC28Q86X40 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC28Q86X40 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LRRC28Q86X40 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.64■□□□□ 0.09
LRRC28Q86X40 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LRRC28Q86X40 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms