Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 AL033527.4-201ENST00000641026 673 ntBASIC12.1□□□□□ -0.47
CSMD3Q7Z407 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 TREML5P-201ENST00000421694 576 ntBASIC12.1□□□□□ -0.47
CSMD3Q7Z407 FAM185BP-201ENST00000443595 716 ntBASIC12.1□□□□□ -0.47
CSMD3Q7Z407 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CSMD3Q7Z407 AC009336.1-201ENST00000608941 1553 ntBASIC12.09□□□□□ -0.47
CSMD3Q7Z407 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 AL590787.1-201ENST00000568856 1315 ntBASIC12.09□□□□□ -0.47
CSMD3Q7Z407 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 AC140658.5-201ENST00000438532 169 ntBASIC12.09□□□□□ -0.47
CSMD3Q7Z407 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 SPDYE14P-201ENST00000442619 822 ntBASIC12.09□□□□□ -0.47
CSMD3Q7Z407 AC125807.1-201ENST00000483097 614 ntBASIC12.09□□□□□ -0.47
CSMD3Q7Z407 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 AC112191.1-201ENST00000523689 701 ntBASIC12.09□□□□□ -0.47
CSMD3Q7Z407 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 MIR6799-201ENST00000620297 69 ntBASIC12.09□□□□□ -0.47
CSMD3Q7Z407 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CSMD3Q7Z407 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC12.08□□□□□ -0.47
CSMD3Q7Z407 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
CSMD3Q7Z407 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.08□□□□□ -0.48
CSMD3Q7Z407 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC12.08□□□□□ -0.48
CSMD3Q7Z407 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD3Q7Z407 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC12.08□□□□□ -0.48
CSMD3Q7Z407 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD3Q7Z407 PI4KAP1-204ENST00000612579 1703 ntBASIC12.08□□□□□ -0.48
CSMD3Q7Z407 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD3Q7Z407 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.08□□□□□ -0.48
CSMD3Q7Z407 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms