Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf88Q6PI97 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf88Q6PI97 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf88Q6PI97 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.37■□□□□ 0.05
C11orf88Q6PI97 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf88Q6PI97 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf88Q6PI97 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
C11orf88Q6PI97 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 B3GAT3P1-201ENST00000471720 806 ntBASIC15.36■□□□□ 0.05
C11orf88Q6PI97 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 AL049597.2-201ENST00000565575 961 ntBASIC15.36■□□□□ 0.05
C11orf88Q6PI97 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf88Q6PI97 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 AL096828.2-201ENST00000567259 1965 ntBASIC15.35■□□□□ 0.05
C11orf88Q6PI97 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 PCDH8P1-201ENST00000428983 2773 ntBASIC15.35■□□□□ 0.05
C11orf88Q6PI97 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 LIN28AP1-201ENST00000429574 405 ntBASIC15.35■□□□□ 0.05
C11orf88Q6PI97 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 RN7SL850P-201ENST00000579959 291 ntBASIC15.35■□□□□ 0.05
C11orf88Q6PI97 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 MYLKP1-201ENST00000509077 1580 ntBASIC15.35■□□□□ 0.05
C11orf88Q6PI97 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.35■□□□□ 0.05
C11orf88Q6PI97 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.34■□□□□ 0.05
C11orf88Q6PI97 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms