Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 BX276092.5-203ENST00000456199 560 ntBASIC18.21■□□□□ 0.51
LRRC38Q5VT99 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 FAM86EP-206ENST00000510506 987 ntBASIC18.21■□□□□ 0.51
LRRC38Q5VT99 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 KRT8P10-201ENST00000450021 1447 ntBASIC18.21■□□□□ 0.51
LRRC38Q5VT99 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
LRRC38Q5VT99 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LRRC38Q5VT99 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 AC016734.2-201ENST00000624325 1377 ntBASIC18.2■□□□□ 0.5
LRRC38Q5VT99 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 VENTXP7-201ENST00000475503 772 ntBASIC18.2■□□□□ 0.5
LRRC38Q5VT99 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 AC011467.2-201ENST00000598425 242 ntBASIC18.2■□□□□ 0.5
LRRC38Q5VT99 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 OR6D1P-202ENST00000641007 5290 ntBASIC18.2■□□□□ 0.5
LRRC38Q5VT99 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LRRC38Q5VT99 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 NTF6B-201ENST00000591913 560 ntBASIC18.19■□□□□ 0.5
LRRC38Q5VT99 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 AC116407.4-201ENST00000623319 1061 ntBASIC18.19■□□□□ 0.5
LRRC38Q5VT99 AC106820.2-201ENST00000563775 3264 ntBASIC18.19■□□□□ 0.5
LRRC38Q5VT99 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms