Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LINC00242Q5T6M2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.02□□□□□ -0.48
LINC00242Q5T6M2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.02□□□□□ -0.48
LINC00242Q5T6M2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00242Q5T6M2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00242Q5T6M2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00242Q5T6M2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00242Q5T6M2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00242Q5T6M2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00242Q5T6M2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00242Q5T6M2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00242Q5T6M2 AC046158.3-201ENST00000624947 2558 ntBASIC12.02□□□□□ -0.48
LINC00242Q5T6M2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LINC00242Q5T6M2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 AL139384.1-201ENST00000612143 3047 ntBASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 C2orf69P3-201ENST00000565542 1120 ntBASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 AL603756.1-201ENST00000606511 2163 ntBASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LINC00242Q5T6M2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 AC009947.2-201ENST00000444014 672 ntBASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 UBE2SP1-201ENST00000450587 669 ntBASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 FITM1-202ENST00000559294 800 ntBASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 AC142381.4-202ENST00000563973 229 ntBASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 ITM2C-210ENST00000620962 501 ntBASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 AC046185.3-201ENST00000623228 1824 ntBASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
LINC00242Q5T6M2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms