Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RNFT1Q5M7Z0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.76■□□□□ 0.11
RNFT1Q5M7Z0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RNFT1Q5M7Z0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 DNAJB3-201ENST00000446806 729 ntBASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 HCG4B-203ENST00000450128 991 ntBASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 AL805961.1-202ENST00000641562 540 ntBASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 BICD1-207ENST00000551848 1962 ntBASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNFT1Q5M7Z0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 ABALON-201ENST00000629058 1903 ntBASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 GPR89P-201ENST00000407924 1495 ntBASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 MIR3687-2-201ENST00000577708 61 ntBASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 MIR3687-1-201ENST00000614492 61 ntBASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNFT1Q5M7Z0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNFT1Q5M7Z0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.73■□□□□ 0.11
RNFT1Q5M7Z0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNFT1Q5M7Z0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNFT1Q5M7Z0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNFT1Q5M7Z0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.73■□□□□ 0.11
RNFT1Q5M7Z0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNFT1Q5M7Z0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNFT1Q5M7Z0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms