Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 AC068472.1-201ENST00000474589 881 ntBASIC17.1■□□□□ 0.33
SGO1Q5FBB7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 LINC01451-201ENST00000623792 534 ntBASIC17.1■□□□□ 0.33
SGO1Q5FBB7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 SIRPAP1-201ENST00000448467 1770 ntBASIC17.1■□□□□ 0.33
SGO1Q5FBB7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SGO1Q5FBB7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 RCN1P1-201ENST00000400413 996 ntBASIC17.09■□□□□ 0.33
SGO1Q5FBB7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 AC063952.2-201ENST00000498792 1227 ntBASIC17.09■□□□□ 0.33
SGO1Q5FBB7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 AL390719.2-201ENST00000606993 987 ntBASIC17.09■□□□□ 0.33
SGO1Q5FBB7 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.09■□□□□ 0.33
SGO1Q5FBB7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SGO1Q5FBB7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SGO1Q5FBB7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SGO1Q5FBB7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SGO1Q5FBB7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SGO1Q5FBB7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SGO1Q5FBB7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SGO1Q5FBB7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.08■□□□□ 0.33
SGO1Q5FBB7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SGO1Q5FBB7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
SGO1Q5FBB7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.08■□□□□ 0.33
SGO1Q5FBB7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SGO1Q5FBB7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SGO1Q5FBB7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 SPDYE13P-201ENST00000445314 798 ntBASIC17.08■□□□□ 0.32
SGO1Q5FBB7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SGO1Q5FBB7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.07■□□□□ 0.32
SGO1Q5FBB7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.07■□□□□ 0.32
SGO1Q5FBB7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.07■□□□□ 0.32
SGO1Q5FBB7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGO1Q5FBB7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGO1Q5FBB7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGO1Q5FBB7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.07■□□□□ 0.32
SGO1Q5FBB7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGO1Q5FBB7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGO1Q5FBB7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGO1Q5FBB7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SGO1Q5FBB7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms