Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 TOB2P1-201ENST00000469761 992 ntBASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 AL023806.1-201ENST00000603994 1649 ntBASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.79■□□□□ 0.44
KHDC1Q4VXA5 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 AL162727.3-201ENST00000635661 2787 ntBASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 MTCL1P1-201ENST00000446207 792 ntBASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 LINC00265-3P-201ENST00000447588 903 ntBASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 AC092329.2-201ENST00000598402 547 ntBASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 AL353801.3-201ENST00000609898 542 ntBASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 AC100803.2-201ENST00000562459 1963 ntBASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 AC233702.3-201ENST00000578656 1387 ntBASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
KHDC1Q4VXA5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms