Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 AC106820.2-201ENST00000563775 3264 ntBASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN20Q4JDL3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PTPN20Q4JDL3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
PTPN20Q4JDL3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PTPN20Q4JDL3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 AC012313.10-201ENST00000623509 926 ntBASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 AC073592.5-201ENST00000624854 528 ntBASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 PMPCAP1-201ENST00000508114 1576 ntBASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPN20Q4JDL3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 AC046185.3-201ENST00000623228 1824 ntBASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 AL591684.3-201ENST00000605187 298 ntBASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 AP000867.4-201ENST00000641616 219 ntBASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN20Q4JDL3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 BCL2-203ENST00000589955 5011 ntBASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms