Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 AC092910.1-201ENST00000482027 1129 ntBASIC21.15■□□□□ 0.98
RFX7Q2KHR2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 AC140113.2-201ENST00000604370 208 ntBASIC21.15■□□□□ 0.98
RFX7Q2KHR2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.14■□□□□ 0.98
RFX7Q2KHR2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
RFX7Q2KHR2 ZNF259P1-201ENST00000407656 1365 ntBASIC21.14■□□□□ 0.98
RFX7Q2KHR2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RFX7Q2KHR2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RFX7Q2KHR2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFX7Q2KHR2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.14■□□□□ 0.98
RFX7Q2KHR2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
RFX7Q2KHR2 RNA5SP415-201ENST00000517246 115 ntBASIC21.14■□□□□ 0.98
RFX7Q2KHR2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC21.14■□□□□ 0.98
RFX7Q2KHR2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.14■□□□□ 0.98
RFX7Q2KHR2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.14■□□□□ 0.98
RFX7Q2KHR2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFX7Q2KHR2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RFX7Q2KHR2 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFX7Q2KHR2 AC016396.2-201ENST00000562575 1417 ntBASIC21.14■□□□□ 0.97
RFX7Q2KHR2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RFX7Q2KHR2 AC046185.3-201ENST00000623228 1824 ntBASIC21.14■□□□□ 0.97
RFX7Q2KHR2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RFX7Q2KHR2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RFX7Q2KHR2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RFX7Q2KHR2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.13■□□□□ 0.97
RFX7Q2KHR2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFX7Q2KHR2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RFX7Q2KHR2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.12■□□□□ 0.97
RFX7Q2KHR2 SLC25A1P3-201ENST00000395415 828 ntBASIC21.12■□□□□ 0.97
RFX7Q2KHR2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.12■□□□□ 0.97
RFX7Q2KHR2 BX842568.4-201ENST00000421222 227 ntBASIC21.12■□□□□ 0.97
RFX7Q2KHR2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.12■□□□□ 0.97
RFX7Q2KHR2 AC105339.3-201ENST00000560043 636 ntBASIC21.12■□□□□ 0.97
RFX7Q2KHR2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.12■□□□□ 0.97
RFX7Q2KHR2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.12■□□□□ 0.97
RFX7Q2KHR2 AL022326.1-202ENST00000641533 845 ntBASIC21.12■□□□□ 0.97
RFX7Q2KHR2 PMS2P7-201ENST00000506558 1336 ntBASIC21.12■□□□□ 0.97
RFX7Q2KHR2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC21.12■□□□□ 0.97
RFX7Q2KHR2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RFX7Q2KHR2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.12■□□□□ 0.97
RFX7Q2KHR2 PP12613-201ENST00000424958 2230 ntBASIC21.12■□□□□ 0.97
RFX7Q2KHR2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.12■□□□□ 0.97
RFX7Q2KHR2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFX7Q2KHR2 AC073621.1-201ENST00000392730 636 ntBASIC21.11■□□□□ 0.97
RFX7Q2KHR2 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.11■□□□□ 0.97
RFX7Q2KHR2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.11■□□□□ 0.97
RFX7Q2KHR2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.11■□□□□ 0.97
RFX7Q2KHR2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RFX7Q2KHR2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC21.11■□□□□ 0.97
RFX7Q2KHR2 FAM197Y3-203ENST00000618346 717 ntBASIC21.11■□□□□ 0.97
RFX7Q2KHR2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RFX7Q2KHR2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFX7Q2KHR2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFX7Q2KHR2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RFX7Q2KHR2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.11■□□□□ 0.97
RFX7Q2KHR2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RFX7Q2KHR2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.11■□□□□ 0.97
RFX7Q2KHR2 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.11■□□□□ 0.97
RFX7Q2KHR2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RFX7Q2KHR2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC21.11■□□□□ 0.97
RFX7Q2KHR2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
RFX7Q2KHR2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms