Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.94■□□□□ 0.94
PDS5AQ29RF7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDS5AQ29RF7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 RPSAP43-201ENST00000402237 625 ntBASIC20.93■□□□□ 0.94
PDS5AQ29RF7 MIR1233-2-201ENST00000408138 82 ntBASIC20.93■□□□□ 0.94
PDS5AQ29RF7 MIR1233-1-201ENST00000408722 82 ntBASIC20.93■□□□□ 0.94
PDS5AQ29RF7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 MCCD1P2-201ENST00000423228 335 ntBASIC20.93■□□□□ 0.94
PDS5AQ29RF7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDS5AQ29RF7 AC008764.6-201ENST00000595909 2069 ntBASIC20.93■□□□□ 0.94
PDS5AQ29RF7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDS5AQ29RF7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDS5AQ29RF7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.91■□□□□ 0.94
PDS5AQ29RF7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDS5AQ29RF7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
PDS5AQ29RF7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDS5AQ29RF7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDS5AQ29RF7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDS5AQ29RF7 RHOQP3-201ENST00000437982 621 ntBASIC20.91■□□□□ 0.94
PDS5AQ29RF7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.91■□□□□ 0.94
PDS5AQ29RF7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDS5AQ29RF7 AL390961.4-201ENST00000623958 2535 ntBASIC20.91■□□□□ 0.94
PDS5AQ29RF7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PDS5AQ29RF7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDS5AQ29RF7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDS5AQ29RF7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDS5AQ29RF7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDS5AQ29RF7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PDS5AQ29RF7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 AC012317.2-201ENST00000623305 2251 ntBASIC20.9■□□□□ 0.94
PDS5AQ29RF7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 AC096734.2-201ENST00000562054 433 ntBASIC20.9■□□□□ 0.94
PDS5AQ29RF7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 AC010507.1-201ENST00000633895 436 ntBASIC20.9■□□□□ 0.94
PDS5AQ29RF7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms