Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH17Q12864 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.74■□□□□ 0.43
CDH17Q12864 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CDH17Q12864 AC019129.2-201ENST00000609837 1235 ntBASIC17.74■□□□□ 0.43
CDH17Q12864 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH17Q12864 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH17Q12864 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH17Q12864 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH17Q12864 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH17Q12864 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CDH17Q12864 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CDH17Q12864 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CDH17Q12864 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CDH17Q12864 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH17Q12864 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH17Q12864 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH17Q12864 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.73■□□□□ 0.43
CDH17Q12864 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.73■□□□□ 0.43
CDH17Q12864 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.73■□□□□ 0.43
CDH17Q12864 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.73■□□□□ 0.43
CDH17Q12864 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH17Q12864 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDH17Q12864 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CDH17Q12864 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CDH17Q12864 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH17Q12864 AC103564.2-201ENST00000432853 1299 ntBASIC17.73■□□□□ 0.43
CDH17Q12864 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH17Q12864 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.73■□□□□ 0.43
CDH17Q12864 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.73■□□□□ 0.43
CDH17Q12864 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.73■□□□□ 0.43
CDH17Q12864 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.73■□□□□ 0.43
CDH17Q12864 AC109462.3-201ENST00000573934 613 ntBASIC17.73■□□□□ 0.43
CDH17Q12864 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CDH17Q12864 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.73■□□□□ 0.43
CDH17Q12864 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.73■□□□□ 0.43
CDH17Q12864 AC012313.1-201ENST00000593393 3059 ntBASIC17.73■□□□□ 0.43
CDH17Q12864 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH17Q12864 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH17Q12864 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.73■□□□□ 0.43
CDH17Q12864 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH17Q12864 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH17Q12864 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDH17Q12864 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH17Q12864 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH17Q12864 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH17Q12864 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH17Q12864 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.72■□□□□ 0.43
CDH17Q12864 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDH17Q12864 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH17Q12864 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH17Q12864 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDH17Q12864 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.72■□□□□ 0.43
CDH17Q12864 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH17Q12864 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH17Q12864 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDH17Q12864 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CDH17Q12864 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CDH17Q12864 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.72■□□□□ 0.43
CDH17Q12864 TSSC2-201ENST00000450217 709 ntBASIC17.72■□□□□ 0.43
CDH17Q12864 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.72■□□□□ 0.43
CDH17Q12864 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.72■□□□□ 0.43
CDH17Q12864 AC009533.2-201ENST00000543664 586 ntBASIC17.72■□□□□ 0.43
CDH17Q12864 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.72■□□□□ 0.43
CDH17Q12864 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH17Q12864 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.72■□□□□ 0.43
CDH17Q12864 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDH17Q12864 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH17Q12864 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH17Q12864 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH17Q12864 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH17Q12864 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH17Q12864 KRT18P1-202ENST00000452408 1331 ntBASIC17.72■□□□□ 0.43
CDH17Q12864 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH17Q12864 PRORSD1P-202ENST00000563365 2154 ntBASIC17.72■□□□□ 0.43
CDH17Q12864 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CDH17Q12864 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms