Protein–RNA interactions for Protein: P60510

PPP4C, Serine/threonine-protein phosphatase 4 catalytic subunit, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4CP60510 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.68■□□□□ 0.9
PPP4CP60510 AC055717.3-201ENST00000622967 595 ntBASIC20.68■□□□□ 0.9
PPP4CP60510 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.68■□□□□ 0.9
PPP4CP60510 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.68■□□□□ 0.9
PPP4CP60510 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP4CP60510 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.68■□□□□ 0.9
PPP4CP60510 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPP4CP60510 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PPP4CP60510 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP4CP60510 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP4CP60510 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4CP60510 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PPP4CP60510 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4CP60510 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.67■□□□□ 0.9
PPP4CP60510 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PPP4CP60510 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4CP60510 AC008764.6-201ENST00000595909 2069 ntBASIC20.67■□□□□ 0.9
PPP4CP60510 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4CP60510 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4CP60510 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.67■□□□□ 0.9
PPP4CP60510 PAWRP1-201ENST00000451083 565 ntBASIC20.67■□□□□ 0.9
PPP4CP60510 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.67■□□□□ 0.9
PPP4CP60510 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4CP60510 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.67■□□□□ 0.9
PPP4CP60510 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4CP60510 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.67■□□□□ 0.9
PPP4CP60510 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.67■□□□□ 0.9
PPP4CP60510 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4CP60510 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.67■□□□□ 0.9
PPP4CP60510 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.67■□□□□ 0.9
PPP4CP60510 AC092865.6-201ENST00000642101 219 ntBASIC20.67■□□□□ 0.9
PPP4CP60510 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.67■□□□□ 0.9
PPP4CP60510 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4CP60510 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4CP60510 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4CP60510 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PPP4CP60510 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PPP4CP60510 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4CP60510 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4CP60510 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.67■□□□□ 0.9
PPP4CP60510 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP4CP60510 AL355312.1-201ENST00000407115 2176 ntBASIC20.66■□□□□ 0.9
PPP4CP60510 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.66■□□□□ 0.9
PPP4CP60510 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4CP60510 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PPP4CP60510 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4CP60510 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4CP60510 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
PPP4CP60510 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.66■□□□□ 0.9
PPP4CP60510 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4CP60510 RHOQP3-201ENST00000437982 621 ntBASIC20.66■□□□□ 0.9
PPP4CP60510 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.66■□□□□ 0.9
PPP4CP60510 AC096734.2-201ENST00000562054 433 ntBASIC20.66■□□□□ 0.9
PPP4CP60510 MTDHP5-201ENST00000598980 586 ntBASIC20.66■□□□□ 0.9
PPP4CP60510 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PPP4CP60510 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4CP60510 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4CP60510 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4CP60510 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
PPP4CP60510 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.66■□□□□ 0.9
PPP4CP60510 PI4KAP1-204ENST00000612579 1703 ntBASIC20.66■□□□□ 0.9
PPP4CP60510 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.66■□□□□ 0.9
PPP4CP60510 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.66■□□□□ 0.9
PPP4CP60510 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4CP60510 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.66■□□□□ 0.9
PPP4CP60510 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4CP60510 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4CP60510 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.66■□□□□ 0.9
PPP4CP60510 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4CP60510 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.66■□□□□ 0.9
PPP4CP60510 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4CP60510 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP4CP60510 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4CP60510 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4CP60510 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.65■□□□□ 0.9
PPP4CP60510 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4CP60510 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4CP60510 AC002310.6-201ENST00000624451 1377 ntBASIC20.65■□□□□ 0.9
PPP4CP60510 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.65■□□□□ 0.9
PPP4CP60510 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4CP60510 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.65■□□□□ 0.9
PPP4CP60510 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PPP4CP60510 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.65■□□□□ 0.9
PPP4CP60510 AC010327.4-202ENST00000591484 748 ntBASIC20.65■□□□□ 0.9
PPP4CP60510 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4CP60510 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4CP60510 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.65■□□□□ 0.9
PPP4CP60510 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4CP60510 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4CP60510 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
PPP4CP60510 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.65■□□□□ 0.9
PPP4CP60510 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.65■□□□□ 0.9
PPP4CP60510 NOC2LP1-202ENST00000452600 2235 ntBASIC20.65■□□□□ 0.9
PPP4CP60510 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4CP60510 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PPP4CP60510 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
PPP4CP60510 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4CP60510 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4CP60510 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4CP60510 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms