Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN20P56880 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CLDN20P56880 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
CLDN20P56880 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CLDN20P56880 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN20P56880 FOSL1P1-201ENST00000511041 816 ntBASIC16.12■□□□□ 0.17
CLDN20P56880 DUTP2-201ENST00000519164 463 ntBASIC16.12■□□□□ 0.17
CLDN20P56880 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN20P56880 AC138894.3-201ENST00000603787 634 ntBASIC16.12■□□□□ 0.17
CLDN20P56880 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN20P56880 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CLDN20P56880 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CLDN20P56880 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN20P56880 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN20P56880 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN20P56880 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN20P56880 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN20P56880 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN20P56880 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN20P56880 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CLDN20P56880 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN20P56880 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN20P56880 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CLDN20P56880 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CLDN20P56880 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CLDN20P56880 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CLDN20P56880 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 NUS1P1-201ENST00000446295 882 ntBASIC16.11■□□□□ 0.17
CLDN20P56880 MINOS1P3-201ENST00000457048 203 ntBASIC16.11■□□□□ 0.17
CLDN20P56880 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDN20P56880 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN20P56880 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDN20P56880 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDN20P56880 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.11■□□□□ 0.17
CLDN20P56880 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN20P56880 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDN20P56880 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN20P56880 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDN20P56880 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CLDN20P56880 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
CLDN20P56880 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CLDN20P56880 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN20P56880 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN20P56880 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLDN20P56880 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN20P56880 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN20P56880 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CLDN20P56880 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CLDN20P56880 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CLDN20P56880 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN20P56880 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
CLDN20P56880 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN20P56880 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CLDN20P56880 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN20P56880 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CLDN20P56880 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN20P56880 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN20P56880 KRT126P-201ENST00000549467 1181 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms