Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH4P55283 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH4P55283 AC068880.1-201ENST00000507289 2297 ntBASIC17.93■□□□□ 0.46
CDH4P55283 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH4P55283 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH4P55283 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH4P55283 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH4P55283 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH4P55283 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH4P55283 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
CDH4P55283 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH4P55283 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.93■□□□□ 0.46
CDH4P55283 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH4P55283 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH4P55283 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH4P55283 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH4P55283 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH4P55283 AC148477.8-201ENST00000624298 468 ntBASIC17.93■□□□□ 0.46
CDH4P55283 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH4P55283 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH4P55283 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH4P55283 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CDH4P55283 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH4P55283 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH4P55283 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH4P55283 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH4P55283 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH4P55283 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH4P55283 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH4P55283 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH4P55283 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH4P55283 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH4P55283 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH4P55283 RPS2P28-201ENST00000314255 741 ntBASIC17.92■□□□□ 0.46
CDH4P55283 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDH4P55283 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH4P55283 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH4P55283 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH4P55283 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH4P55283 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH4P55283 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH4P55283 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH4P55283 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH4P55283 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH4P55283 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH4P55283 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH4P55283 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH4P55283 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH4P55283 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH4P55283 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CDH4P55283 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH4P55283 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH4P55283 AC046185.3-201ENST00000623228 1824 ntBASIC17.91■□□□□ 0.46
CDH4P55283 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH4P55283 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.91■□□□□ 0.46
CDH4P55283 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CDH4P55283 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH4P55283 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH4P55283 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH4P55283 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH4P55283 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH4P55283 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CDH4P55283 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH4P55283 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH4P55283 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH4P55283 LYSMD4-203ENST00000378904 2122 ntBASIC17.91■□□□□ 0.46
CDH4P55283 AL031284.1-201ENST00000419297 478 ntBASIC17.91■□□□□ 0.46
CDH4P55283 RPS2P1-201ENST00000434010 821 ntBASIC17.91■□□□□ 0.46
CDH4P55283 HNRNPDP1-201ENST00000439535 754 ntBASIC17.91■□□□□ 0.46
CDH4P55283 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH4P55283 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CDH4P55283 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH4P55283 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.91■□□□□ 0.46
CDH4P55283 OR7E14P-202ENST00000530490 1290 ntBASIC17.91■□□□□ 0.46
CDH4P55283 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH4P55283 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CDH4P55283 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH4P55283 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.91■□□□□ 0.46
CDH4P55283 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.91■□□□□ 0.46
CDH4P55283 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH4P55283 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH4P55283 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
CDH4P55283 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH4P55283 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH4P55283 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.91■□□□□ 0.46
CDH4P55283 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH4P55283 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH4P55283 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH4P55283 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CDH4P55283 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH4P55283 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH4P55283 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDH4P55283 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH4P55283 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH4P55283 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH4P55283 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH4P55283 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH4P55283 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH4P55283 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH4P55283 LAGE3P1-201ENST00000425356 484 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms