Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ATP1B3P54709 AC133561.5-201ENST00000635547 218 ntBASIC15.27■□□□□ 0.04
ATP1B3P54709 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP1B3P54709 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP1B3P54709 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP1B3P54709 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
ATP1B3P54709 HLA-J-201ENST00000462773 1622 ntBASIC15.27■□□□□ 0.03
ATP1B3P54709 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATP1B3P54709 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
ATP1B3P54709 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
ATP1B3P54709 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP1B3P54709 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.27■□□□□ 0.03
ATP1B3P54709 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP1B3P54709 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP1B3P54709 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.27■□□□□ 0.03
ATP1B3P54709 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.03
ATP1B3P54709 UBALD1-205ENST00000590891 2641 ntBASIC15.27■□□□□ 0.03
ATP1B3P54709 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
ATP1B3P54709 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATP1B3P54709 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATP1B3P54709 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATP1B3P54709 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ATP1B3P54709 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
ATP1B3P54709 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ATP1B3P54709 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.26■□□□□ 0.03
ATP1B3P54709 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.26■□□□□ 0.03
ATP1B3P54709 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
ATP1B3P54709 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.26■□□□□ 0.03
ATP1B3P54709 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.26■□□□□ 0.03
ATP1B3P54709 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ATP1B3P54709 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ATP1B3P54709 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.26■□□□□ 0.03
ATP1B3P54709 STARP1-201ENST00000397973 869 ntBASIC15.26■□□□□ 0.03
ATP1B3P54709 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.26■□□□□ 0.03
ATP1B3P54709 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
ATP1B3P54709 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.26■□□□□ 0.03
ATP1B3P54709 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ATP1B3P54709 AC009154.2-201ENST00000621177 724 ntBASIC15.26■□□□□ 0.03
ATP1B3P54709 AC079602.3-201ENST00000623931 403 ntBASIC15.26■□□□□ 0.03
ATP1B3P54709 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ATP1B3P54709 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 AC009949.1-201ENST00000623048 1830 ntBASIC15.26■□□□□ 0.03
ATP1B3P54709 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.26■□□□□ 0.03
ATP1B3P54709 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.26■□□□□ 0.03
ATP1B3P54709 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATP1B3P54709 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.26■□□□□ 0.03
ATP1B3P54709 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.26■□□□□ 0.03
ATP1B3P54709 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.26■□□□□ 0.03
ATP1B3P54709 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ATP1B3P54709 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP1B3P54709 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP1B3P54709 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP1B3P54709 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.25■□□□□ 0.03
ATP1B3P54709 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.25■□□□□ 0.03
ATP1B3P54709 LINC00304-203ENST00000565008 1864 ntBASIC15.25■□□□□ 0.03
ATP1B3P54709 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.25■□□□□ 0.03
ATP1B3P54709 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP1B3P54709 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.25■□□□□ 0.03
ATP1B3P54709 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATP1B3P54709 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ATP1B3P54709 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
ATP1B3P54709 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP1B3P54709 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP1B3P54709 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATP1B3P54709 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.25■□□□□ 0.03
ATP1B3P54709 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP1B3P54709 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP1B3P54709 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.25■□□□□ 0.03
ATP1B3P54709 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP1B3P54709 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.25■□□□□ 0.03
ATP1B3P54709 AC113347.1-201ENST00000413321 391 ntBASIC15.25■□□□□ 0.03
ATP1B3P54709 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.25■□□□□ 0.03
ATP1B3P54709 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.25■□□□□ 0.03
ATP1B3P54709 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATP1B3P54709 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.25■□□□□ 0.03
ATP1B3P54709 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.25■□□□□ 0.03
ATP1B3P54709 AC004263.2-201ENST00000617183 678 ntBASIC15.25■□□□□ 0.03
ATP1B3P54709 AC011558.1-201ENST00000623459 338 ntBASIC15.25■□□□□ 0.03
ATP1B3P54709 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms