Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CACNA2D1P54289 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.61■□□□□ 0.57
CACNA2D1P54289 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CACNA2D1P54289 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.61■□□□□ 0.57
CACNA2D1P54289 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CACNA2D1P54289 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CACNA2D1P54289 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 AC006116.8-202ENST00000587620 1550 ntBASIC18.6■□□□□ 0.57
CACNA2D1P54289 BX276092.7-203ENST00000637198 1536 ntBASIC18.6■□□□□ 0.57
CACNA2D1P54289 AL353593.2-201ENST00000602529 1483 ntBASIC18.6■□□□□ 0.57
CACNA2D1P54289 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.6■□□□□ 0.57
CACNA2D1P54289 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CACNA2D1P54289 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.6■□□□□ 0.57
CACNA2D1P54289 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.6■□□□□ 0.57
CACNA2D1P54289 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.6■□□□□ 0.57
CACNA2D1P54289 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CACNA2D1P54289 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 KRT18P67-201ENST00000432816 1264 ntBASIC18.6■□□□□ 0.57
CACNA2D1P54289 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.6■□□□□ 0.57
CACNA2D1P54289 RNPS1P1-201ENST00000507437 918 ntBASIC18.6■□□□□ 0.57
CACNA2D1P54289 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.6■□□□□ 0.57
CACNA2D1P54289 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.6■□□□□ 0.57
CACNA2D1P54289 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.6■□□□□ 0.57
CACNA2D1P54289 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 AL049840.3-201ENST00000602669 611 ntBASIC18.6■□□□□ 0.57
CACNA2D1P54289 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 AC073592.5-201ENST00000624854 528 ntBASIC18.6■□□□□ 0.57
CACNA2D1P54289 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
CACNA2D1P54289 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.6■□□□□ 0.57
CACNA2D1P54289 AL356309.3-201ENST00000624132 1934 ntBASIC18.6■□□□□ 0.57
CACNA2D1P54289 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CACNA2D1P54289 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CACNA2D1P54289 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CACNA2D1P54289 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA2D1P54289 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA2D1P54289 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CACNA2D1P54289 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA2D1P54289 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA2D1P54289 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.59■□□□□ 0.57
CACNA2D1P54289 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA2D1P54289 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.59■□□□□ 0.57
CACNA2D1P54289 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.59■□□□□ 0.57
CACNA2D1P54289 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.59■□□□□ 0.57
CACNA2D1P54289 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CACNA2D1P54289 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.59■□□□□ 0.57
CACNA2D1P54289 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CACNA2D1P54289 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA2D1P54289 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CACNA2D1P54289 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA2D1P54289 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.59■□□□□ 0.57
CACNA2D1P54289 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.59■□□□□ 0.57
CACNA2D1P54289 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA2D1P54289 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA2D1P54289 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.59■□□□□ 0.57
CACNA2D1P54289 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA2D1P54289 AC103564.2-201ENST00000432853 1299 ntBASIC18.59■□□□□ 0.57
CACNA2D1P54289 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.59■□□□□ 0.57
CACNA2D1P54289 BX005266.1-201ENST00000473402 457 ntBASIC18.59■□□□□ 0.57
CACNA2D1P54289 AC109462.3-201ENST00000573934 613 ntBASIC18.59■□□□□ 0.57
CACNA2D1P54289 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA2D1P54289 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA2D1P54289 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CACNA2D1P54289 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA2D1P54289 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
CACNA2D1P54289 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CACNA2D1P54289 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CACNA2D1P54289 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
CACNA2D1P54289 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA2D1P54289 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.58■□□□□ 0.57
CACNA2D1P54289 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA2D1P54289 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA2D1P54289 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.58■□□□□ 0.57
CACNA2D1P54289 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.58■□□□□ 0.57
CACNA2D1P54289 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA2D1P54289 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.58■□□□□ 0.57
CACNA2D1P54289 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA2D1P54289 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA2D1P54289 AC008764.6-201ENST00000595909 2069 ntBASIC18.58■□□□□ 0.57
CACNA2D1P54289 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA2D1P54289 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CACNA2D1P54289 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CACNA2D1P54289 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms