Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.13■□□□□ 0.49
COPAP53621 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.13■□□□□ 0.49
COPAP53621 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPAP53621 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.13■□□□□ 0.49
COPAP53621 AL671883.3-201ENST00000603274 991 ntBASIC18.13■□□□□ 0.49
COPAP53621 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.13■□□□□ 0.49
COPAP53621 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
COPAP53621 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPAP53621 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPAP53621 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPAP53621 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPAP53621 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPAP53621 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPAP53621 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPAP53621 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPAP53621 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.12■□□□□ 0.49
COPAP53621 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPAP53621 AC138028.4-201ENST00000564984 1845 ntBASIC18.12■□□□□ 0.49
COPAP53621 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPAP53621 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
COPAP53621 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.12■□□□□ 0.49
COPAP53621 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPAP53621 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
COPAP53621 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPAP53621 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPAP53621 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPAP53621 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.12■□□□□ 0.49
COPAP53621 RBM17P3-201ENST00000417687 1192 ntBASIC18.12■□□□□ 0.49
COPAP53621 AC018712.1-201ENST00000455767 687 ntBASIC18.12■□□□□ 0.49
COPAP53621 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.12■□□□□ 0.49
COPAP53621 AF186996.4-201ENST00000467186 377 ntBASIC18.12■□□□□ 0.49
COPAP53621 AC112698.1-201ENST00000510299 916 ntBASIC18.12■□□□□ 0.49
COPAP53621 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.12■□□□□ 0.49
COPAP53621 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.12■□□□□ 0.49
COPAP53621 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.12■□□□□ 0.49
COPAP53621 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.12■□□□□ 0.49
COPAP53621 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.12■□□□□ 0.49
COPAP53621 IL9RP2-201ENST00000423948 1312 ntBASIC18.12■□□□□ 0.49
COPAP53621 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPAP53621 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
COPAP53621 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
COPAP53621 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.12■□□□□ 0.49
COPAP53621 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
COPAP53621 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COPAP53621 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COPAP53621 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.12■□□□□ 0.49
COPAP53621 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COPAP53621 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPAP53621 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.11■□□□□ 0.49
COPAP53621 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
COPAP53621 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPAP53621 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.11■□□□□ 0.49
COPAP53621 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.11■□□□□ 0.49
COPAP53621 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.11■□□□□ 0.49
COPAP53621 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
COPAP53621 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
COPAP53621 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.11■□□□□ 0.49
COPAP53621 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.11■□□□□ 0.49
COPAP53621 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COPAP53621 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.11■□□□□ 0.49
COPAP53621 MTDHP3-201ENST00000594186 672 ntBASIC18.11■□□□□ 0.49
COPAP53621 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.11■□□□□ 0.49
COPAP53621 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.11■□□□□ 0.49
COPAP53621 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.11■□□□□ 0.49
COPAP53621 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.11■□□□□ 0.49
COPAP53621 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
COPAP53621 GMCL1P1-201ENST00000463439 1581 ntBASIC18.11■□□□□ 0.49
COPAP53621 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPAP53621 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
COPAP53621 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
COPAP53621 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.11■□□□□ 0.49
COPAP53621 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.11■□□□□ 0.49
COPAP53621 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.11■□□□□ 0.49
COPAP53621 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPAP53621 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.11■□□□□ 0.49
COPAP53621 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COPAP53621 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.11■□□□□ 0.49
COPAP53621 PKD1P1-201ENST00000458669 6805 ntBASIC18.11■□□□□ 0.49
COPAP53621 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COPAP53621 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPAP53621 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
COPAP53621 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.1■□□□□ 0.49
COPAP53621 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.1■□□□□ 0.49
COPAP53621 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
COPAP53621 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPAP53621 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPAP53621 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
COPAP53621 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPAP53621 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
COPAP53621 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.1■□□□□ 0.49
COPAP53621 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.1■□□□□ 0.49
COPAP53621 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COPAP53621 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.1■□□□□ 0.49
COPAP53621 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.1■□□□□ 0.49
COPAP53621 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPAP53621 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPAP53621 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.1■□□□□ 0.49
COPAP53621 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COPAP53621 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.1■□□□□ 0.49
COPAP53621 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms