Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC004817.3-201ENST00000602957 2129 ntBASIC19.82■□□□□ 0.76
USP11P51784 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP11P51784 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP11P51784 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.82■□□□□ 0.76
USP11P51784 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP11P51784 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.82■□□□□ 0.76
USP11P51784 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
USP11P51784 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP11P51784 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP11P51784 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP11P51784 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP11P51784 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
USP11P51784 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP11P51784 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP11P51784 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
USP11P51784 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP11P51784 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP11P51784 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.81■□□□□ 0.76
USP11P51784 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.81■□□□□ 0.76
USP11P51784 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP11P51784 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP11P51784 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.81■□□□□ 0.76
USP11P51784 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP11P51784 KRT18P67-201ENST00000432816 1264 ntBASIC19.81■□□□□ 0.76
USP11P51784 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.81■□□□□ 0.76
USP11P51784 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.81■□□□□ 0.76
USP11P51784 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP11P51784 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.81■□□□□ 0.76
USP11P51784 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.81■□□□□ 0.76
USP11P51784 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.81■□□□□ 0.76
USP11P51784 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.81■□□□□ 0.76
USP11P51784 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP11P51784 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
USP11P51784 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.81■□□□□ 0.76
USP11P51784 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
USP11P51784 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP11P51784 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.81■□□□□ 0.76
USP11P51784 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP11P51784 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP11P51784 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
USP11P51784 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
USP11P51784 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP11P51784 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
USP11P51784 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
USP11P51784 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP11P51784 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.8■□□□□ 0.76
USP11P51784 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP11P51784 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP11P51784 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP11P51784 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP11P51784 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
USP11P51784 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.8■□□□□ 0.76
USP11P51784 AC018712.1-201ENST00000455767 687 ntBASIC19.8■□□□□ 0.76
USP11P51784 AF186996.4-201ENST00000467186 377 ntBASIC19.8■□□□□ 0.76
USP11P51784 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
USP11P51784 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
USP11P51784 AC073648.2-201ENST00000510116 352 ntBASIC19.8■□□□□ 0.76
USP11P51784 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.8■□□□□ 0.76
USP11P51784 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.8■□□□□ 0.76
USP11P51784 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.8■□□□□ 0.76
USP11P51784 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.8■□□□□ 0.76
USP11P51784 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.8■□□□□ 0.76
USP11P51784 LINC00896-202ENST00000609602 2128 ntBASIC19.8■□□□□ 0.76
USP11P51784 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP11P51784 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP11P51784 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP11P51784 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP11P51784 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
USP11P51784 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP11P51784 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP11P51784 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP11P51784 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
USP11P51784 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP11P51784 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP11P51784 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP11P51784 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP11P51784 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.79■□□□□ 0.76
USP11P51784 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP11P51784 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP11P51784 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP11P51784 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
USP11P51784 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
USP11P51784 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP11P51784 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
USP11P51784 FDX1P1-201ENST00000449115 551 ntBASIC19.79■□□□□ 0.76
USP11P51784 AL662844.1-201ENST00000546340 181 ntBASIC19.79■□□□□ 0.76
USP11P51784 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
USP11P51784 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.79■□□□□ 0.76
USP11P51784 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.79■□□□□ 0.76
USP11P51784 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.79■□□□□ 0.76
USP11P51784 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
USP11P51784 AC025062.2-201ENST00000605477 670 ntBASIC19.79■□□□□ 0.76
USP11P51784 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP11P51784 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.79■□□□□ 0.76
USP11P51784 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.79■□□□□ 0.76
USP11P51784 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP11P51784 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.79■□□□□ 0.76
USP11P51784 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
USP11P51784 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP11P51784 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms