Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CBX5P45973 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.17■□□□□ 0.02
CBX5P45973 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
CBX5P45973 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CBX5P45973 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CBX5P45973 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CBX5P45973 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CBX5P45973 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CBX5P45973 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CBX5P45973 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.17■□□□□ 0.02
CBX5P45973 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CBX5P45973 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CBX5P45973 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 AC023824.1-201ENST00000562945 2975 ntBASIC15.16■□□□□ 0.02
CBX5P45973 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.16■□□□□ 0.02
CBX5P45973 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.16■□□□□ 0.02
CBX5P45973 AC011676.5-201ENST00000624864 2660 ntBASIC15.16■□□□□ 0.02
CBX5P45973 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.16■□□□□ 0.02
CBX5P45973 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.16■□□□□ 0.02
CBX5P45973 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.16■□□□□ 0.02
CBX5P45973 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.16■□□□□ 0.02
CBX5P45973 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.16■□□□□ 0.02
CBX5P45973 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.16■□□□□ 0.02
CBX5P45973 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.16■□□□□ 0.02
CBX5P45973 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.16■□□□□ 0.02
CBX5P45973 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.16■□□□□ 0.02
CBX5P45973 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CBX5P45973 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
CBX5P45973 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CBX5P45973 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.16■□□□□ 0.02
CBX5P45973 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CBX5P45973 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.16■□□□□ 0.02
CBX5P45973 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
CBX5P45973 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.16■□□□□ 0.02
CBX5P45973 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.16■□□□□ 0.02
CBX5P45973 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.16■□□□□ 0.02
CBX5P45973 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CBX5P45973 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.15■□□□□ 0.02
CBX5P45973 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.15■□□□□ 0.02
CBX5P45973 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.15■□□□□ 0.02
CBX5P45973 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.15■□□□□ 0.02
CBX5P45973 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.15■□□□□ 0.02
CBX5P45973 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 AC104390.1-201ENST00000555663 520 ntBASIC15.15■□□□□ 0.02
CBX5P45973 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.15■□□□□ 0.02
CBX5P45973 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.15■□□□□ 0.02
CBX5P45973 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.15■□□□□ 0.02
CBX5P45973 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.15■□□□□ 0.02
CBX5P45973 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.15■□□□□ 0.02
CBX5P45973 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CBX5P45973 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
CBX5P45973 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.15■□□□□ 0.02
CBX5P45973 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CBX5P45973 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CBX5P45973 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms