Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MMP13P45452 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
MMP13P45452 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP13P45452 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP13P45452 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP13P45452 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.28■□□□□ 0.52
MMP13P45452 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MMP13P45452 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
MMP13P45452 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MMP13P45452 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MMP13P45452 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.27■□□□□ 0.52
MMP13P45452 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MMP13P45452 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
MMP13P45452 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
MMP13P45452 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
MMP13P45452 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MMP13P45452 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
MMP13P45452 UBALD1-205ENST00000590891 2641 ntBASIC18.27■□□□□ 0.52
MMP13P45452 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.27■□□□□ 0.52
MMP13P45452 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MMP13P45452 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
MMP13P45452 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
MMP13P45452 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MMP13P45452 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MMP13P45452 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.52
MMP13P45452 AC068472.1-201ENST00000474589 881 ntBASIC18.27■□□□□ 0.52
MMP13P45452 AC090616.6-201ENST00000582640 721 ntBASIC18.27■□□□□ 0.52
MMP13P45452 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
MMP13P45452 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.27■□□□□ 0.52
MMP13P45452 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.27■□□□□ 0.52
MMP13P45452 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.27■□□□□ 0.52
MMP13P45452 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
MMP13P45452 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MMP13P45452 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.27■□□□□ 0.52
MMP13P45452 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
MMP13P45452 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
MMP13P45452 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
MMP13P45452 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
MMP13P45452 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MMP13P45452 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.27■□□□□ 0.51
MMP13P45452 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MMP13P45452 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MMP13P45452 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MMP13P45452 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
MMP13P45452 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
MMP13P45452 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MMP13P45452 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
MMP13P45452 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.27■□□□□ 0.51
MMP13P45452 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 AC100803.2-201ENST00000562459 1963 ntBASIC18.26■□□□□ 0.51
MMP13P45452 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MMP13P45452 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
MMP13P45452 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.26■□□□□ 0.51
MMP13P45452 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.26■□□□□ 0.51
MMP13P45452 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.26■□□□□ 0.51
MMP13P45452 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.26■□□□□ 0.51
MMP13P45452 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 MTCL1P1-201ENST00000446207 792 ntBASIC18.26■□□□□ 0.51
MMP13P45452 AC112698.1-201ENST00000510299 916 ntBASIC18.26■□□□□ 0.51
MMP13P45452 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.26■□□□□ 0.51
MMP13P45452 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.26■□□□□ 0.51
MMP13P45452 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MMP13P45452 AL592071.1-201ENST00000611956 408 ntBASIC18.26■□□□□ 0.51
MMP13P45452 IGHV3-41-201ENST00000613121 348 ntBASIC18.26■□□□□ 0.51
MMP13P45452 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.26■□□□□ 0.51
MMP13P45452 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.26■□□□□ 0.51
MMP13P45452 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
MMP13P45452 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 AC016734.2-201ENST00000624325 1377 ntBASIC18.26■□□□□ 0.51
MMP13P45452 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
MMP13P45452 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
MMP13P45452 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.26■□□□□ 0.51
MMP13P45452 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.26■□□□□ 0.51
MMP13P45452 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP13P45452 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
MMP13P45452 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP13P45452 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.25■□□□□ 0.51
MMP13P45452 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP13P45452 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP13P45452 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MMP13P45452 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
MMP13P45452 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms